Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0149 |
Symbol | |
ID | 5388121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 168760 |
End bp | 169758 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640863111 |
Product | putative sugar ABC transporter, permease protein |
Protein accession | YP_001399146 |
Protein GI | 153949034 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.356378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAC GACCGCGCAA AGTAAAATGG GTTTTGCCGA AAGGCGCGAC ACAATTTGGT GCACTGGCAG TTATTTTATT GATTGATAGT CTGGTCGCAC CGCATTTCTT CTCTATCCAT ATTCAGGATG GCCGGCTGTT TGGCAGTATT ATTGATATTT TAAACCGCGG CGCCCCCGTT GCTTTATTGG CGCTGGGAAT GACATTAGTC ATTGCGACGG GTGGCATTGA TTTATCGGTC GGTGCGGTCA TGGCTATCGC TGGAGCGACT GCCGCGACGT TGACCAGTGC GGGATACCCG TTCATGACGG TGCTAGCGCT GTCACTCGCT GTCGGGGCGC TATGTGGTTT GTGGAATGGT TTCTTAGTGG CGGTATTACA AATCCAGCCA ATAGTTGCCA CGCTAATGTT GATGGTCGCC GGGCGCGGAA TCGCTCAGCT TATTACTGAA GGCCAGATTG TTACTTTTGA TAGTGGCGGT TTGGCAACGC TTGGTAGCAG TACGCTGATG TATTTACCCA TGTCAGTGGT TATTGCATGT AGCATGTTAA TTCTGGTGTG GTTGCTAACC CGTAAAACGG CGCTTGGGTT GTTCATTGAG TCAGTCGGTA TCAACTTACG ATCTGCTCGG AATGCAGGTG TGAGTACCCG TTTAGTGCTG ATTGCCGTTT ATGTGATTTG CGGTGTGTGC GCTGCGGTGG CGGGTATTAT TGTGACCGCT GATATTCGTG GTGCTGATGC GAACAATGCG GGCTTATGGC TGGAGTTGGA CGCGATATTG GCGGTAGTTA TCGGTGGTGC ATCGTTGATG GGCGGACGTT TTAATCTACT ACTTTCCGTT ATTGGCGCTT TAATTATTCA GGGTATGAAT ACTGGGATTT TACTTTCTGG TTATCAGCCG GAGTTTAATT TGGTGCTTAA AGCCATTGTC GTGCTGGCCG TATTAGTTGT GCAATCCCCG ATGATCTCAT TAAGCCATCT CTTCCAGAGG CGAAAATAA
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Protein sequence | MTQRPRKVKW VLPKGATQFG ALAVILLIDS LVAPHFFSIH IQDGRLFGSI IDILNRGAPV ALLALGMTLV IATGGIDLSV GAVMAIAGAT AATLTSAGYP FMTVLALSLA VGALCGLWNG FLVAVLQIQP IVATLMLMVA GRGIAQLITE GQIVTFDSGG LATLGSSTLM YLPMSVVIAC SMLILVWLLT RKTALGLFIE SVGINLRSAR NAGVSTRLVL IAVYVICGVC AAVAGIIVTA DIRGADANNA GLWLELDAIL AVVIGGASLM GGRFNLLLSV IGALIIQGMN TGILLSGYQP EFNLVLKAIV VLAVLVVQSP MISLSHLFQR RK
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