Gene YpsIP31758_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0149 
Symbol 
ID5388121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp168760 
End bp169758 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content49% 
IMG OID640863111 
Productputative sugar ABC transporter, permease protein 
Protein accessionYP_001399146 
Protein GI153949034 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.356378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAC GACCGCGCAA AGTAAAATGG GTTTTGCCGA AAGGCGCGAC ACAATTTGGT 
GCACTGGCAG TTATTTTATT GATTGATAGT CTGGTCGCAC CGCATTTCTT CTCTATCCAT
ATTCAGGATG GCCGGCTGTT TGGCAGTATT ATTGATATTT TAAACCGCGG CGCCCCCGTT
GCTTTATTGG CGCTGGGAAT GACATTAGTC ATTGCGACGG GTGGCATTGA TTTATCGGTC
GGTGCGGTCA TGGCTATCGC TGGAGCGACT GCCGCGACGT TGACCAGTGC GGGATACCCG
TTCATGACGG TGCTAGCGCT GTCACTCGCT GTCGGGGCGC TATGTGGTTT GTGGAATGGT
TTCTTAGTGG CGGTATTACA AATCCAGCCA ATAGTTGCCA CGCTAATGTT GATGGTCGCC
GGGCGCGGAA TCGCTCAGCT TATTACTGAA GGCCAGATTG TTACTTTTGA TAGTGGCGGT
TTGGCAACGC TTGGTAGCAG TACGCTGATG TATTTACCCA TGTCAGTGGT TATTGCATGT
AGCATGTTAA TTCTGGTGTG GTTGCTAACC CGTAAAACGG CGCTTGGGTT GTTCATTGAG
TCAGTCGGTA TCAACTTACG ATCTGCTCGG AATGCAGGTG TGAGTACCCG TTTAGTGCTG
ATTGCCGTTT ATGTGATTTG CGGTGTGTGC GCTGCGGTGG CGGGTATTAT TGTGACCGCT
GATATTCGTG GTGCTGATGC GAACAATGCG GGCTTATGGC TGGAGTTGGA CGCGATATTG
GCGGTAGTTA TCGGTGGTGC ATCGTTGATG GGCGGACGTT TTAATCTACT ACTTTCCGTT
ATTGGCGCTT TAATTATTCA GGGTATGAAT ACTGGGATTT TACTTTCTGG TTATCAGCCG
GAGTTTAATT TGGTGCTTAA AGCCATTGTC GTGCTGGCCG TATTAGTTGT GCAATCCCCG
ATGATCTCAT TAAGCCATCT CTTCCAGAGG CGAAAATAA
 
Protein sequence
MTQRPRKVKW VLPKGATQFG ALAVILLIDS LVAPHFFSIH IQDGRLFGSI IDILNRGAPV 
ALLALGMTLV IATGGIDLSV GAVMAIAGAT AATLTSAGYP FMTVLALSLA VGALCGLWNG
FLVAVLQIQP IVATLMLMVA GRGIAQLITE GQIVTFDSGG LATLGSSTLM YLPMSVVIAC
SMLILVWLLT RKTALGLFIE SVGINLRSAR NAGVSTRLVL IAVYVICGVC AAVAGIIVTA
DIRGADANNA GLWLELDAIL AVVIGGASLM GGRFNLLLSV IGALIIQGMN TGILLSGYQP
EFNLVLKAIV VLAVLVVQSP MISLSHLFQR RK