Gene YpsIP31758_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0147 
Symbol 
ID5386067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp166195 
End bp167151 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content46% 
IMG OID640863109 
Productputative sugar ABC transporter, periplasmic sugar-binding protein 
Protein accessionYP_001399144 
Protein GI153947696 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00228478 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAGGC GTTTACTGTT AGCAGCAGCT GTAACAGCGG CAATGTGTAG TGCAGTTCAG 
GCAGCTCCGT TAGTTGTCGG TTTTTCTCAA ATTGGTTCAG AATCCGGTTG GCGCTCTGCG 
GAAACCAAGG TTGCGAAACA AGAAGCGGAA AAGCGTGGGA TAACACTCAA GATCGCGGAT 
GCTCAACAAA AACAAGAGAA CCAAATAAAA GCTGTGAGAT CTTTTATTGC TCAAGGTGTT 
GATGCGATCT TTATCGCACC TGTAGTGGCT ACCGGTTGGA CGCCAGTCTT ACAGGAAGCG 
AAAGAAGCCA AGATACCTGT ATTCCTGCTC GACCGTATGA TTGAGGTGAA TGATCCTTCT 
TTGTATACGG CGGCTGTTGC CTCTGACAGT GTATATGAGG GGAAAGTTGC GGGTGAGTGG 
CTATTGCAAG ATGTAGCAGG CAAACCCTGT AATGTTGTTG AGTTACAAGG CACGGTTGGC 
TCAAGTGTGG CAATTAACCG TAAGAAAGGC TTTGCTGACG GGATAGCTTC GGCACCTGGC 
GTGAAGATAA TCCGCTCTCA GTCAGGGGAT TTCACGCGCA GTAAAGGCAA AGAAGTCATG 
GAAAGCTTCA TTAAAGCGGA GCAAAACGGT AAAAATATTT GCGCGGTCTA TGCGCACAAT 
GACGATATGG CGATTGGAGC TATTCAGGCA ATTAAAGAAG CAGGTTTAAA ACCGGGTTCA 
GATATTAAAA TCGTTTCCAT TGATGGTGTT CCTGATATCT TCAAAGCAAT GAGTAGTGGC 
GAAGCAAACG CGACCGTTGA ATTAACGCCT AATATGGCCG GCCCTGCTTT AGATGCATTA 
ATTGTGCTCA AGAAAGACGG TACCCAGCCA CCTAAATTCA TTCAGACAGA GTCCCGCCTG 
CTCCAGCCAG ACACGGCTAA ACAGGAATAT GAGTTGAAGA AAAGTCTTGG TTATTGA
 
Protein sequence
MYRRLLLAAA VTAAMCSAVQ AAPLVVGFSQ IGSESGWRSA ETKVAKQEAE KRGITLKIAD 
AQQKQENQIK AVRSFIAQGV DAIFIAPVVA TGWTPVLQEA KEAKIPVFLL DRMIEVNDPS 
LYTAAVASDS VYEGKVAGEW LLQDVAGKPC NVVELQGTVG SSVAINRKKG FADGIASAPG 
VKIIRSQSGD FTRSKGKEVM ESFIKAEQNG KNICAVYAHN DDMAIGAIQA IKEAGLKPGS 
DIKIVSIDGV PDIFKAMSSG EANATVELTP NMAGPALDAL IVLKKDGTQP PKFIQTESRL 
LQPDTAKQEY ELKKSLGY