Gene YpsIP31758_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0130 
SymbolhasR 
ID5386792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp141229 
End bp143721 
Gene Length2493 bp 
Protein Length830 aa 
Translation table11 
GC content44% 
IMG OID640863089 
ProductTonB-dependent heme receptor HasR 
Protein accessionYP_001399130 
Protein GI153950786 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATA TAATTAGAGA TAAAAAAACA ATAATTTCAG TGAATAAAAT TACAACTTGT 
ATATTATTCG CATTGGTAAC GCAAAGCTAT TCAGGGCAGC TAGCGGCAAA TACAGCTACA
ATCCCCACTA ATAATAACGA TATGGCGTTG GATAAATTAA ACGTCGAAGG TAAAGGGAAT
GCCCATGATA GCGATTGGAT ATATGACGAA CCCCGCTCGG TCAGTGAAAT TACGCGGGAA
CAACTTGATA ACCGGCCCGC TCGCCACGCT GCAGATATTT TAGAACAAAC TCCCGGTGTC
TATTCCAGCG TTAGCCAACA AGACCCTGGG CTTTCAATAA ATATTCGGGG CATACAAGAT
TATGGCCGTG TAAATATGAA TATTGACGGT ATGCGTCAGA ACTTTATGAA AAGCGGTCAT
GGTCAGCGCA ATGGGTCGAT GTATATTGAC CCAGAAATTT TAAGCAATGT GGTGATTGAA
CGGGGCATTT TCAACGGTAT TGGTGGGGCG GGAGCCATTG GCGGTATTGC CACCTTTAAT
ACCATCAATG CCAGTGATTT TCTGGCGCCA GATAAAGAGC TGGGCGGGCA TATCCGGGCA
ATGACCGGGG ATAACGGCAC CCGCTTTATT GGCAGCGGTG CGTTGGCGCT GGGCAACTCA
AATGGCGATA TATTACTTGC TGTTAGTGAA CGTAACCTGA AGGATTATTG GCCGGGGAAG
AAAGGTGTTT TGGCCGGGTT GCGTCTCTAT AGCCCTACCA GAAACGTCGG CGATGACTTA
AAGAATACCA AGACATTGTT TACAGGCTAT AAAATGCGTT CGCAGCTCGC TAAAGTCGGT
TGGAATTTTG AGGCCGGCCA GCGTTTGGAG TTCAGCTATT TACAAACACA AATCGCCAGC
CCCAATGCCA GTATGCTGTC AGAAGTTCTG GCATTGTCGC CATCAGGGAA AGAGATAACA
AAGATTGGCT GGAGGAACAC AAGTTTTACT AACGTGGAAA ACCGTAATAT TGCGTTAGAT
TACCGCCTGA ATCCTGAGCA TATTAGTTGG CTGGATGCAA CGGCAAAGAT CTATTACGTT
GATACCAATG ATGAAACTGA TAATGCTAAT TCCCTTTTCA AGGAATATTT CTGGACTCAA
ACACGCCTGA AAACCCGTGG CTTACAATTG CAAAACACCA ATACCTTTAC CCCATCGGAT
GCGCATCAAA TACGGTTGAA ATATGGTTTG GAATGGTTTA GCGATAAATC TGAGGGGTAC
TCAACACGCA AACTTATTGA AAGGACGACC CCCCCCGGCA AGCGCGCTAT CACCAGTACC
TTTGCTCAAC TTAACTACGA ATATGATGAT TGGCTGCGGT TGGAAGGAGG GCTGCGTTAT
GATCAATTCC GTTTGAAAGG CAATACCTGG CTCCATACCC GCTCTTTCCT GCAGCCCTAT
ACTTTTGAGA ACCCCTGTGA CCGAAGGATA CATGAGCAGT CTGAAAAGCC TGGATCGCGG
TGTTCATCTA GGAGACCCGC AACAATGAGG TGGGATGTTG ACCGCCGTGA ACAGCAACTC
TCGCCAACGT TGGCGATGGG GGTCAAGCCT GGCCTCGAAT GGCTGGAGTT TTTTGGCAGC
TACGGTAAAT CCTGGCGGCC ACCGGCAATG ACAGAAGTGT TAGCAACCGG CACCGCCCAT
GGTTACAGTT GGGTCTTACC TAATCCTTTC GTGGCCGCCG AACGTGCCAG AACGTGGGAG
GCGGGGTTTA ATATTCAGCA GTCCAATTTA TTTATCGAAG ACGATCACTT TGCCGCGAAG
GTCGCTTATT TTGATACCCG TATTGCCAAC TATATTAACC TTGAATTAGG TAAGGCCAAA
CCCAAGTTTG GGGGGGATTC TTTTACTGAT GTAGCTTATG TCAATAATTT ACTCAAAACC
CGTTTCCGTG GCTTAGAATA TCAATTAAGT TATGATGCTG GCACATTTTA TACCAATATT
AATTACACCA GAATGATTGG TGTAAATAAT GTTTGTTCAC CATATGCTTG GTTAGGCGGC
TTACAGTCAG TAAAATATAA GTACGTTGGA AAGGTAGAGC AAATTTATGC CGTTGAAAAT
GAGGTGGCCA ATAATTATGT AACCTGTATG AATGCCAATG TGTTATTTGG CTCATCGGCT
TATTTACCGG GTGATCGCGG TAGTTTAACT TTGGGGAGTA GAATATTTGA TAGAAGGCTA
GATTTTGGTA CTGTTATCCG TTATAACAAA GGGTATCAGG ATCGTTCAGC GCAAGATGAA
AATGGTAATC CACTGACGGC TTATGTTGCC GATTGGCCGA AGTATATCGT ATATGATCTT
TATGCCAGTT ATAAGGTAAC GAATAATTTA ATATTGCGTA GTTCAATAGA AAATATAACT
AACCGTGCAT ATTTAGTTAA TTATGGCGAT ACACTTTCAT TCGCCCCTAG TCGCGGTAGG
ACTATTCAGG GTGGATTTGA ATATAAATTC TAA
 
Protein sequence
MDNIIRDKKT IISVNKITTC ILFALVTQSY SGQLAANTAT IPTNNNDMAL DKLNVEGKGN 
AHDSDWIYDE PRSVSEITRE QLDNRPARHA ADILEQTPGV YSSVSQQDPG LSINIRGIQD
YGRVNMNIDG MRQNFMKSGH GQRNGSMYID PEILSNVVIE RGIFNGIGGA GAIGGIATFN
TINASDFLAP DKELGGHIRA MTGDNGTRFI GSGALALGNS NGDILLAVSE RNLKDYWPGK
KGVLAGLRLY SPTRNVGDDL KNTKTLFTGY KMRSQLAKVG WNFEAGQRLE FSYLQTQIAS
PNASMLSEVL ALSPSGKEIT KIGWRNTSFT NVENRNIALD YRLNPEHISW LDATAKIYYV
DTNDETDNAN SLFKEYFWTQ TRLKTRGLQL QNTNTFTPSD AHQIRLKYGL EWFSDKSEGY
STRKLIERTT PPGKRAITST FAQLNYEYDD WLRLEGGLRY DQFRLKGNTW LHTRSFLQPY
TFENPCDRRI HEQSEKPGSR CSSRRPATMR WDVDRREQQL SPTLAMGVKP GLEWLEFFGS
YGKSWRPPAM TEVLATGTAH GYSWVLPNPF VAAERARTWE AGFNIQQSNL FIEDDHFAAK
VAYFDTRIAN YINLELGKAK PKFGGDSFTD VAYVNNLLKT RFRGLEYQLS YDAGTFYTNI
NYTRMIGVNN VCSPYAWLGG LQSVKYKYVG KVEQIYAVEN EVANNYVTCM NANVLFGSSA
YLPGDRGSLT LGSRIFDRRL DFGTVIRYNK GYQDRSAQDE NGNPLTAYVA DWPKYIVYDL
YASYKVTNNL ILRSSIENIT NRAYLVNYGD TLSFAPSRGR TIQGGFEYKF