Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0130 |
Symbol | hasR |
ID | 5386792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 141229 |
End bp | 143721 |
Gene Length | 2493 bp |
Protein Length | 830 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640863089 |
Product | TonB-dependent heme receptor HasR |
Protein accession | YP_001399130 |
Protein GI | 153950786 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATA TAATTAGAGA TAAAAAAACA ATAATTTCAG TGAATAAAAT TACAACTTGT ATATTATTCG CATTGGTAAC GCAAAGCTAT TCAGGGCAGC TAGCGGCAAA TACAGCTACA ATCCCCACTA ATAATAACGA TATGGCGTTG GATAAATTAA ACGTCGAAGG TAAAGGGAAT GCCCATGATA GCGATTGGAT ATATGACGAA CCCCGCTCGG TCAGTGAAAT TACGCGGGAA CAACTTGATA ACCGGCCCGC TCGCCACGCT GCAGATATTT TAGAACAAAC TCCCGGTGTC TATTCCAGCG TTAGCCAACA AGACCCTGGG CTTTCAATAA ATATTCGGGG CATACAAGAT TATGGCCGTG TAAATATGAA TATTGACGGT ATGCGTCAGA ACTTTATGAA AAGCGGTCAT GGTCAGCGCA ATGGGTCGAT GTATATTGAC CCAGAAATTT TAAGCAATGT GGTGATTGAA CGGGGCATTT TCAACGGTAT TGGTGGGGCG GGAGCCATTG GCGGTATTGC CACCTTTAAT ACCATCAATG CCAGTGATTT TCTGGCGCCA GATAAAGAGC TGGGCGGGCA TATCCGGGCA ATGACCGGGG ATAACGGCAC CCGCTTTATT GGCAGCGGTG CGTTGGCGCT GGGCAACTCA AATGGCGATA TATTACTTGC TGTTAGTGAA CGTAACCTGA AGGATTATTG GCCGGGGAAG AAAGGTGTTT TGGCCGGGTT GCGTCTCTAT AGCCCTACCA GAAACGTCGG CGATGACTTA AAGAATACCA AGACATTGTT TACAGGCTAT AAAATGCGTT CGCAGCTCGC TAAAGTCGGT TGGAATTTTG AGGCCGGCCA GCGTTTGGAG TTCAGCTATT TACAAACACA AATCGCCAGC CCCAATGCCA GTATGCTGTC AGAAGTTCTG GCATTGTCGC CATCAGGGAA AGAGATAACA AAGATTGGCT GGAGGAACAC AAGTTTTACT AACGTGGAAA ACCGTAATAT TGCGTTAGAT TACCGCCTGA ATCCTGAGCA TATTAGTTGG CTGGATGCAA CGGCAAAGAT CTATTACGTT GATACCAATG ATGAAACTGA TAATGCTAAT TCCCTTTTCA AGGAATATTT CTGGACTCAA ACACGCCTGA AAACCCGTGG CTTACAATTG CAAAACACCA ATACCTTTAC CCCATCGGAT GCGCATCAAA TACGGTTGAA ATATGGTTTG GAATGGTTTA GCGATAAATC TGAGGGGTAC TCAACACGCA AACTTATTGA AAGGACGACC CCCCCCGGCA AGCGCGCTAT CACCAGTACC TTTGCTCAAC TTAACTACGA ATATGATGAT TGGCTGCGGT TGGAAGGAGG GCTGCGTTAT GATCAATTCC GTTTGAAAGG CAATACCTGG CTCCATACCC GCTCTTTCCT GCAGCCCTAT ACTTTTGAGA ACCCCTGTGA CCGAAGGATA CATGAGCAGT CTGAAAAGCC TGGATCGCGG TGTTCATCTA GGAGACCCGC AACAATGAGG TGGGATGTTG ACCGCCGTGA ACAGCAACTC TCGCCAACGT TGGCGATGGG GGTCAAGCCT GGCCTCGAAT GGCTGGAGTT TTTTGGCAGC TACGGTAAAT CCTGGCGGCC ACCGGCAATG ACAGAAGTGT TAGCAACCGG CACCGCCCAT GGTTACAGTT GGGTCTTACC TAATCCTTTC GTGGCCGCCG AACGTGCCAG AACGTGGGAG GCGGGGTTTA ATATTCAGCA GTCCAATTTA TTTATCGAAG ACGATCACTT TGCCGCGAAG GTCGCTTATT TTGATACCCG TATTGCCAAC TATATTAACC TTGAATTAGG TAAGGCCAAA CCCAAGTTTG GGGGGGATTC TTTTACTGAT GTAGCTTATG TCAATAATTT ACTCAAAACC CGTTTCCGTG GCTTAGAATA TCAATTAAGT TATGATGCTG GCACATTTTA TACCAATATT AATTACACCA GAATGATTGG TGTAAATAAT GTTTGTTCAC CATATGCTTG GTTAGGCGGC TTACAGTCAG TAAAATATAA GTACGTTGGA AAGGTAGAGC AAATTTATGC CGTTGAAAAT GAGGTGGCCA ATAATTATGT AACCTGTATG AATGCCAATG TGTTATTTGG CTCATCGGCT TATTTACCGG GTGATCGCGG TAGTTTAACT TTGGGGAGTA GAATATTTGA TAGAAGGCTA GATTTTGGTA CTGTTATCCG TTATAACAAA GGGTATCAGG ATCGTTCAGC GCAAGATGAA AATGGTAATC CACTGACGGC TTATGTTGCC GATTGGCCGA AGTATATCGT ATATGATCTT TATGCCAGTT ATAAGGTAAC GAATAATTTA ATATTGCGTA GTTCAATAGA AAATATAACT AACCGTGCAT ATTTAGTTAA TTATGGCGAT ACACTTTCAT TCGCCCCTAG TCGCGGTAGG ACTATTCAGG GTGGATTTGA ATATAAATTC TAA
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Protein sequence | MDNIIRDKKT IISVNKITTC ILFALVTQSY SGQLAANTAT IPTNNNDMAL DKLNVEGKGN AHDSDWIYDE PRSVSEITRE QLDNRPARHA ADILEQTPGV YSSVSQQDPG LSINIRGIQD YGRVNMNIDG MRQNFMKSGH GQRNGSMYID PEILSNVVIE RGIFNGIGGA GAIGGIATFN TINASDFLAP DKELGGHIRA MTGDNGTRFI GSGALALGNS NGDILLAVSE RNLKDYWPGK KGVLAGLRLY SPTRNVGDDL KNTKTLFTGY KMRSQLAKVG WNFEAGQRLE FSYLQTQIAS PNASMLSEVL ALSPSGKEIT KIGWRNTSFT NVENRNIALD YRLNPEHISW LDATAKIYYV DTNDETDNAN SLFKEYFWTQ TRLKTRGLQL QNTNTFTPSD AHQIRLKYGL EWFSDKSEGY STRKLIERTT PPGKRAITST FAQLNYEYDD WLRLEGGLRY DQFRLKGNTW LHTRSFLQPY TFENPCDRRI HEQSEKPGSR CSSRRPATMR WDVDRREQQL SPTLAMGVKP GLEWLEFFGS YGKSWRPPAM TEVLATGTAH GYSWVLPNPF VAAERARTWE AGFNIQQSNL FIEDDHFAAK VAYFDTRIAN YINLELGKAK PKFGGDSFTD VAYVNNLLKT RFRGLEYQLS YDAGTFYTNI NYTRMIGVNN VCSPYAWLGG LQSVKYKYVG KVEQIYAVEN EVANNYVTCM NANVLFGSSA YLPGDRGSLT LGSRIFDRRL DFGTVIRYNK GYQDRSAQDE NGNPLTAYVA DWPKYIVYDL YASYKVTNNL ILRSSIENIT NRAYLVNYGD TLSFAPSRGR TIQGGFEYKF
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