Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0113 |
Symbol | hslV |
ID | 5384487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 119579 |
End bp | 120103 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640863072 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_001399113 |
Protein GI | 153950787 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAACAA TTGTAAGTGT ACGCCGTGAT GGTCATGTCG TTATTGGTGG CGATGGCCAA GTCACTTTGG GCAATACCGT GATGAAAGGT AATGCCAAAA AAGTCCGCCG TCTTTATAAC AACAAGGTTA TTGCTGGCTT TGCGGGGGGG ACTGCTGATG CCTTTACTCT GTTCGAGTTA TTTGAACGCA AGCTGGAAAT GCATCAAGGC CACCTGACGA AAGCGGCTGT TGAACTAGCC AAAGACTGGC GCACCGACCG TATGCTGCGC AAGCTTGAAG CGTTACTGGC GGTTGCCGAT GAGACCGCTT CACTGATCAT TACTGGTAAC GGTGACGTGG TTCAACCTGA AGATGATCTG ATTGCCATTG GCTCCGGTGG GCCTTATGCC CAATCGGCAG CACGTGCGTT GTTAGAAAAT ACTGAATTAG GTGCGCGGGA TATCGTTGAG AAATCACTGA GTATTGCGGG GGATATTTGT ATCTACACCA ACCGCTTCCA AACCATTGAA GAATTAACAT ACTAA
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Protein sequence | MTTIVSVRRD GHVVIGGDGQ VTLGNTVMKG NAKKVRRLYN NKVIAGFAGG TADAFTLFEL FERKLEMHQG HLTKAAVELA KDWRTDRMLR KLEALLAVAD ETASLIITGN GDVVQPEDDL IAIGSGGPYA QSAARALLEN TELGARDIVE KSLSIAGDIC IYTNRFQTIE ELTY
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