Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0094 |
Symbol | |
ID | 5385714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 100390 |
End bp | 101127 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863053 |
Product | GlcNAc-PI de-N-acetylase family |
Protein accession | YP_001399094 |
Protein GI | 153949433 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATGA TTCCACAAAA AACCGCCTTA GTCGTCAGCG CCCATTCGGC AGATTTTGTC TGGCGCGCAG GTGGGGCTAT CGCTTTACAT GTCGAACAAG GGTATCAAGT TCATATTGTC TGCCTCTCTT ACGGCGAACG TGGTGAATCC GCCAAATTGT GGCGTAAAGG CGACATGACG GAAGAAAGAG TAAAAGCAAG CCGCCACACC GAAGCGCAAG CGGCGGCAAA TGTTCTTGGT GCCAGTATTG AGTTTTTCGA TATGGGTGAC TATCCGTTAC GCGCAGATAA AGAAAGCCTG TTCCGTCTGG CAGACGTCTT CCGCCGCATA CAGCCCCATT TTGTTCTCAC CCATTCGCTG GCCGATCCCT ACAACTATGA CCATCCCCTA GCGGCTAACC TGGCTCAAGA AGCTCGCATT ATCGCTCAGG CAGAAGGGTA TCGACCGGGA GAAGCCATCA TTGGTGCACC ACCCGTGTAC TGCTTCGAGC CGCATCAGCC TGAACAGTGT GGCTGGAAGC CTGACGTATT ACTGGATATC ACATCAGTAT GGGAGAAAAA ATATGCGGCT ATTCAATGCA TGGCCGGTCA GGAACATTTG TGGGAATACT ACACGCGAGT GGCGTTACAA CGTGGGGTAC AAGCAAAACG CAACATCGGC ATTGCCAGTA CCAAGACCAT TATTCATGGC GAAGGTTATC AAAGCCTCTT CCCTCGCGTC ACAGAGGATC TGTCATGA
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Protein sequence | MAMIPQKTAL VVSAHSADFV WRAGGAIALH VEQGYQVHIV CLSYGERGES AKLWRKGDMT EERVKASRHT EAQAAANVLG ASIEFFDMGD YPLRADKESL FRLADVFRRI QPHFVLTHSL ADPYNYDHPL AANLAQEARI IAQAEGYRPG EAIIGAPPVY CFEPHQPEQC GWKPDVLLDI TSVWEKKYAA IQCMAGQEHL WEYYTRVALQ RGVQAKRNIG IASTKTIIHG EGYQSLFPRV TEDLS
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