Gene YpsIP31758_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0094 
Symbol 
ID5385714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp100390 
End bp101127 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID640863053 
ProductGlcNAc-PI de-N-acetylase family 
Protein accessionYP_001399094 
Protein GI153949433 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATGA TTCCACAAAA AACCGCCTTA GTCGTCAGCG CCCATTCGGC AGATTTTGTC 
TGGCGCGCAG GTGGGGCTAT CGCTTTACAT GTCGAACAAG GGTATCAAGT TCATATTGTC
TGCCTCTCTT ACGGCGAACG TGGTGAATCC GCCAAATTGT GGCGTAAAGG CGACATGACG
GAAGAAAGAG TAAAAGCAAG CCGCCACACC GAAGCGCAAG CGGCGGCAAA TGTTCTTGGT
GCCAGTATTG AGTTTTTCGA TATGGGTGAC TATCCGTTAC GCGCAGATAA AGAAAGCCTG
TTCCGTCTGG CAGACGTCTT CCGCCGCATA CAGCCCCATT TTGTTCTCAC CCATTCGCTG
GCCGATCCCT ACAACTATGA CCATCCCCTA GCGGCTAACC TGGCTCAAGA AGCTCGCATT
ATCGCTCAGG CAGAAGGGTA TCGACCGGGA GAAGCCATCA TTGGTGCACC ACCCGTGTAC
TGCTTCGAGC CGCATCAGCC TGAACAGTGT GGCTGGAAGC CTGACGTATT ACTGGATATC
ACATCAGTAT GGGAGAAAAA ATATGCGGCT ATTCAATGCA TGGCCGGTCA GGAACATTTG
TGGGAATACT ACACGCGAGT GGCGTTACAA CGTGGGGTAC AAGCAAAACG CAACATCGGC
ATTGCCAGTA CCAAGACCAT TATTCATGGC GAAGGTTATC AAAGCCTCTT CCCTCGCGTC
ACAGAGGATC TGTCATGA
 
Protein sequence
MAMIPQKTAL VVSAHSADFV WRAGGAIALH VEQGYQVHIV CLSYGERGES AKLWRKGDMT 
EERVKASRHT EAQAAANVLG ASIEFFDMGD YPLRADKESL FRLADVFRRI QPHFVLTHSL
ADPYNYDHPL AANLAQEARI IAQAEGYRPG EAIIGAPPVY CFEPHQPEQC GWKPDVLLDI
TSVWEKKYAA IQCMAGQEHL WEYYTRVALQ RGVQAKRNIG IASTKTIIHG EGYQSLFPRV
TEDLS