Gene YpsIP31758_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0085 
SymbolcpxP 
ID5388348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp91043 
End bp91531 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content47% 
IMG OID640863045 
Productperiplasmic stress adaptor protein CpxP 
Protein accessionYP_001399086 
Protein GI153950411 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.359879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAG TTACAACATT AGTTATGGCG TCAATGTTCG TTCTTGGTTC TTCAGCCGCC 
TTTGCTGCCG ACAACACTAA AGTCACTGAG GGTTACCACG GTGACGGTAA GATGATGATG
AACAAGAAAG GCGACCGCGG TCACCATAAC ATGTTTGATG GCATCAACCT CACTGAACAG
CAGCGTCAGC AAATGCGTGA CTTGATGCGC CAGTCTCACC AAAGTCAGCC GCGCCTTGAT
CTTGAAGATC GCGAGGCAAT GCACAAATTG ATTACTGCCG ATAAATTCGA CGAAGCTGCT
GTAAGAGCGC AGGCTGAGAA AATGTCTCAG AACCAGATTG AGCGCCATGT CGAAATGGCC
AAAGTTCGTA ACCAAATGTA TAACTTGCTC ACACCAGAGC AAAAGGAAGC ATTGAACAAA
AAGCATCAGG AACGTATTGA GAAATTGCAG CAAAAACCAG CAGCACAACC TTCTTCTGCC
CAGAAGTAA
 
Protein sequence
MRKVTTLVMA SMFVLGSSAA FAADNTKVTE GYHGDGKMMM NKKGDRGHHN MFDGINLTEQ 
QRQQMRDLMR QSHQSQPRLD LEDREAMHKL ITADKFDEAA VRAQAEKMSQ NQIERHVEMA
KVRNQMYNLL TPEQKEALNK KHQERIEKLQ QKPAAQPSSA QK