Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0085 |
Symbol | cpxP |
ID | 5388348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 91043 |
End bp | 91531 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640863045 |
Product | periplasmic stress adaptor protein CpxP |
Protein accession | YP_001399086 |
Protein GI | 153950411 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.359879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAG TTACAACATT AGTTATGGCG TCAATGTTCG TTCTTGGTTC TTCAGCCGCC TTTGCTGCCG ACAACACTAA AGTCACTGAG GGTTACCACG GTGACGGTAA GATGATGATG AACAAGAAAG GCGACCGCGG TCACCATAAC ATGTTTGATG GCATCAACCT CACTGAACAG CAGCGTCAGC AAATGCGTGA CTTGATGCGC CAGTCTCACC AAAGTCAGCC GCGCCTTGAT CTTGAAGATC GCGAGGCAAT GCACAAATTG ATTACTGCCG ATAAATTCGA CGAAGCTGCT GTAAGAGCGC AGGCTGAGAA AATGTCTCAG AACCAGATTG AGCGCCATGT CGAAATGGCC AAAGTTCGTA ACCAAATGTA TAACTTGCTC ACACCAGAGC AAAAGGAAGC ATTGAACAAA AAGCATCAGG AACGTATTGA GAAATTGCAG CAAAAACCAG CAGCACAACC TTCTTCTGCC CAGAAGTAA
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Protein sequence | MRKVTTLVMA SMFVLGSSAA FAADNTKVTE GYHGDGKMMM NKKGDRGHHN MFDGINLTEQ QRQQMRDLMR QSHQSQPRLD LEDREAMHKL ITADKFDEAA VRAQAEKMSQ NQIERHVEMA KVRNQMYNLL TPEQKEALNK KHQERIEKLQ QKPAAQPSSA QK
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