| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0079 |
|---|
| Symbol | gpsA |
|---|
| ID | 5388456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 84760 |
|---|
| End bp | 85779 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640863039 |
|---|
| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001399080 |
|---|
| Protein GI | 153950159 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA ACCCTGCTTC AATGGCTGTT ATCGGTGCCG GATCTTACGG CACCGCATTA
GCTATCACAC TGGCGCGTAA TGGCCATCAA GTCGTGTTAT GGGGCCATGA CCCTAAACAT
ATTCAACAGC TGCAACAAGA CCGCTGTAAC CGCGCTTTCC TACCTGATGC TGCTTTCCCC
GATACGTTGC GATTGGAAAC CGACTTAGCA TGTGCGTTGG CTGCCAGCCG CGATGTGTTG
GTCGTCGTGC CCAGCCATGT CTTTGGTGCT GTTTTACATC AGTTGAAGCC TCATCTACGT
AAAGATGCAC GTATCGTCTG GGCAACCAAA GGGCTAGAAG CTGAAACCGG CCGTCTGCTA
CAGGATGTGG CCCGCGAAGT CTTGGGCGAG GCTATCCCGC TTGCCGTGAT TTCTGGTCCA
ACGTTTGCCA AAGAATTGGC CGCGGGTTTG CCTACGGCGA TTGCGTTGGC ATCGACCGAT
GTGCAATTTA GCGAAGATCT GCAACAGTTA TTGCACTGTG GAAAAAGCTT TCGAGTTTAC
AGTAATCCTG ATTTTATCGG GGTACAGCTT GGTGGCGCAG TGAAAAACGT GATTGCCATC
GGTGCAGGTA TGTCCGATGG CATCGGTTTT GGTGCGAATG CCCGTACCGC TCTAATAACC
CGCGGGTTAG CGGAGATGAC GCGCTTAGGG ACAGCATTAG GTGCCGATCC TTCCACCTTT
ATGGGCATGG CAGGGTTAGG CGATTTGGTG CTAACCTGCA CAGATAACCA ATCCCGTAAC
CGCCGATTTG GCATTATGCT GGGTCAGGGG TTGGGGGTGA AGGAGGCGCA GGACAACATT
GGTCAAGTGG TAGAAGGTTA CCGTAATACC AAGGAAGTTC TGGCATTAGC ACAGCGTCAT
GGCGTCGAAA TGCCAATAAC TGAACAAATT TATCAAGTGT TGTATTGTCA TAAGAATGCT
CGTGAGGCGG CTCTGACGTT GTTGGGGCGG ACCAAAAAAG ATGAAAAAAT CGGCATTTGA
|
|---|
| Protein sequence | MNTNPASMAV IGAGSYGTAL AITLARNGHQ VVLWGHDPKH IQQLQQDRCN RAFLPDAAFP
DTLRLETDLA CALAASRDVL VVVPSHVFGA VLHQLKPHLR KDARIVWATK GLEAETGRLL
QDVAREVLGE AIPLAVISGP TFAKELAAGL PTAIALASTD VQFSEDLQQL LHCGKSFRVY
SNPDFIGVQL GGAVKNVIAI GAGMSDGIGF GANARTALIT RGLAEMTRLG TALGADPSTF
MGMAGLGDLV LTCTDNQSRN RRFGIMLGQG LGVKEAQDNI GQVVEGYRNT KEVLALAQRH
GVEMPITEQI YQVLYCHKNA REAALTLLGR TKKDEKIGI
|
|---|
| |