| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0068 |
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| Symbol | rfaC |
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| ID | 5388214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 73415 |
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| End bp | 74380 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640863028 |
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| Product | ADP-heptose:LPS heptosyl transferase I |
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| Protein accession | YP_001399069 |
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| Protein GI | 153950792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.0575052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACGTAT TAATCGTTAA AACCTCGTCA ATGGGCGATG TTTTACATAC CTTACCCGCG
CTGACGGATG CCATGAATGC CATACCCGGT ATTCGCTTCG ATTGGGTGGT AGAAGAAGGG
TTCAGCCAAA TCCCCAGTTG GCATCCGGCG GTGGATAAAG TGATCCCGGT GGCCATCCGC
CGTTGGCGTA AAAACTGGTT TGGTAGTGAT ACCCGGCAGG AACGCTGTGA TTTTAAGCGT
GTGGTACAAC AACGCAGTTA TGATCGGGTC ATTGATGCCC AAGGGTTGAT TAAAAGCGCC
GCGCTGATAA CCCGGATTGC GAAAGGCACG AAGCACGGGC CGGATTGTAA AAGTGCCCGT
GAGCCGTTTG CCAGTTGGTT TTATAACTGC CGCCATGAAA TTGATACCAA ACAACATGCC
GTAGAACGTA TACGTCAACT GTTTGCTAAA AGCCTCGGCT ATGATAAACC GGAAAGTTAT
GGCGACTATG CCATCGCACA ACGCTTTTTA AATCAGTTAC CGGCCGATGC AGGTCAGTAC
TTGGTTTTCC TACATGCGAC GACCCGTGAC AACAAGCACT GGCCCGAGAG CCATTGGGTA
CAATTGATTG AGTTAGTGCA ACCCACAGGT TTAAAAATCA AACTACCGTG GGGCGCAGAA
CATGAGCATC AGCGCGCTTT ACGATTAGCG GAACATTTCC CACACGTAGA GGTTCTGCCT
AAGCTCAGTC TTCAGCAGGT CGCCGAGGTT CTGGCGGGTG CAAAAGCCGT AGTCTCTGTC
GATACTGGCC TCAGCCATCT GACCGCCGCC CTGGATCGCC CAAACATTAC GCTGTTTGGC
CCCACTGACC CCGGTTTAAT CGGCGGCTAC GGGAAAAACC AAATTGCCGT GATTTCCGAG
CAAAAAAAGA TGGATAGCCT CTCTGCGCCC ACTATTATGG CACGATTAGA AACACTCATT
TCATAG
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| Protein sequence | MHVLIVKTSS MGDVLHTLPA LTDAMNAIPG IRFDWVVEEG FSQIPSWHPA VDKVIPVAIR
RWRKNWFGSD TRQERCDFKR VVQQRSYDRV IDAQGLIKSA ALITRIAKGT KHGPDCKSAR
EPFASWFYNC RHEIDTKQHA VERIRQLFAK SLGYDKPESY GDYAIAQRFL NQLPADAGQY
LVFLHATTRD NKHWPESHWV QLIELVQPTG LKIKLPWGAE HEHQRALRLA EHFPHVEVLP
KLSLQQVAEV LAGAKAVVSV DTGLSHLTAA LDRPNITLFG PTDPGLIGGY GKNQIAVISE
QKKMDSLSAP TIMARLETLI S
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