Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0056 |
Symbol | rph |
ID | 5385287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 63985 |
End bp | 64701 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863016 |
Product | ribonuclease PH |
Protein accession | YP_001399057 |
Protein GI | 153946899 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.187742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCCAG CAGACCGAGC AGCTCAACAA GTTCGCCCAC TGACTTTGAC CCGTAATTAC ACGAAACACG CTGAAGGTTC AGTGTTGGTT GAATTCGGCG ATACCAAAGT ATTGTGTACC GCCACAGTTG AAGAAGGTGT TCCACGCTTT CTGAAAGGCC AGGGCCAAGG GTGGATAACG GCAGAATATG GCATGTTGCC TCGTTCGACC CATAGCCGTA ATGCGCGCGA AGCCGCAAAA GGTAAACAAG GTGGGCGTAC TCTTGAAATC CAACGTCTGA TCGCCCGTTC TTTACGTGCA GCGGTCGATT TGAAAAAGTT GGGTGAATTT ACCATCACCT TAGACTGCGA TGTATTGCAA GCGGATGGTG GCACCCGTAC CGCCTCAATC AGTGGTGCTT GTGTAGCATT GGCTGACGCG CTGAACAAAC TGGTTGCTAG TGGTAAATTG AAAGCTAACC CGATGAAGGG CCTGGTTGCT GCTGTGTCTG TCGGGATCGT TAAAGGCGAG GCTCTTTGCG ATCTGGAATA CGTAGAAGAT TCTGCGGCAG AAACAGATAT GAATGTGGTG ATGATGGAAG ATGGCCGGAT GATTGAGGTG CAAGGCACCG CTGAAGGTGA GCCGTTCAGT CACGAAGAAT TATTGGCGTT GCTGGATCTG GCCCGCGGAG GGATAGAAAC CATCTTCCAG GCGCAGAAGG CGGCATTGGA ATCATAA
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Protein sequence | MRPADRAAQQ VRPLTLTRNY TKHAEGSVLV EFGDTKVLCT ATVEEGVPRF LKGQGQGWIT AEYGMLPRST HSRNAREAAK GKQGGRTLEI QRLIARSLRA AVDLKKLGEF TITLDCDVLQ ADGGTRTASI SGACVALADA LNKLVASGKL KANPMKGLVA AVSVGIVKGE ALCDLEYVED SAAETDMNVV MMEDGRMIEV QGTAEGEPFS HEELLALLDL ARGGIETIFQ AQKAALES
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