Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0055 |
Symbol | |
ID | 5388320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 62995 |
End bp | 63858 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863015 |
Product | hypothetical protein |
Protein accession | YP_001399056 |
Protein GI | 153947343 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.926553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCA GCATGACCGC CTACGCTCGA CGTGATATTA AGGGTGAATG GGGCAACGCA GCCTGGGAGC TGCGTTCCGT TAACCAACGC TATTTAGAAA CGTACATTCG CTTACCAGAA CAATTCCGGA GTCTGGAACC GGTGATCCGC GAACGTATTC GCAGCCGTCT GACACGGGGA AAGATTGAAT GTCATTTACG TTTTGAGTTG GATGCCAACG CACAAAGCTC TTTGATCCTC AATGAAAAAC TGGCGAAGCA GTTAGTTGAA GCCGGTAATT GGGTCAAGAT GCAAAGTGAT GAAGGCGAAA TTAACCCAGT AGATATCCTG CGCTGGCCAG GGGTAATGTC TGCTGAGGAA CAAGATTTGG ATGCGATTAG CACCGAGTTA ATGCAGGCGC TAGATACCGC CCTAGACGAT TTTATTGTTT CCCGAGAAAC TGAAGGGGCA GCACTGAAAA CGCTTATCGA GCAGCGTTTA GAGGGGGTCA GCGCTGAAGT GGTTAAAGTC CGCGCACATA TGCCAAATAT CTTGCAGTGG CAACGTGAGC GCTTACTGAA CAAACTGGAA GAAGCGCAAG TTCAGTTGGA AAATACTCGT TTGGAGCAGG AGTTAGTGCT AATGGCACAA CGTATCGATG TGGCCGAAGA GCTAGATCGT TTGGAAGCGC ACGTCAAAGA AACATACAAC ATTCTGAAGA AGAAAGAAGC CGTTGGCCGC CGCCTTGATT TTATGATGCA AGAATTCAAC CGCGAGTCGA ATACGCTGGC ATCAAAATCC ATCAATGCCG AGGTCACTAA CTCCGCCATC GAGTTAAAGG TGTTGATTGA GCAGATGCGC GAACAGATCC AAAATATTGA GTAA
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Protein sequence | MIRSMTAYAR RDIKGEWGNA AWELRSVNQR YLETYIRLPE QFRSLEPVIR ERIRSRLTRG KIECHLRFEL DANAQSSLIL NEKLAKQLVE AGNWVKMQSD EGEINPVDIL RWPGVMSAEE QDLDAISTEL MQALDTALDD FIVSRETEGA ALKTLIEQRL EGVSAEVVKV RAHMPNILQW QRERLLNKLE EAQVQLENTR LEQELVLMAQ RIDVAEELDR LEAHVKETYN ILKKKEAVGR RLDFMMQEFN RESNTLASKS INAEVTNSAI ELKVLIEQMR EQIQNIE
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