| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0038 |
|---|
| Symbol | trmH |
|---|
| ID | 5388507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 46681 |
|---|
| End bp | 47373 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640862998 |
|---|
| Product | tRNA guanosine-2'-O-methyltransferase |
|---|
| Protein accession | YP_001399039 |
|---|
| Protein GI | 153947104 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTC AACGCTATGC GCGGATTTGT GACATGCTTG CCACCAGGCA ACCCGATTTA
ACGGTCTGTC TGGAGCAAGT CCACAAACCT CATAATGTCT CCGCCATTAT TCGAACTGCC
GATGCCGTGG GCATCCATCA AGTTCATGCC ATCTGGCCAA CAACGCAAAT GTATACTCGG
CTGTCCGCCG CCGCAGGCAG TAATAGCTGG GTGCAAGTCA AAACGCATCC CCATATTGCT
GATGCCATTG CTTATCTAAA ATCACAAGAT ATGCAAATTC TGGCGACACA TCTGTCTGAT
AAGGCTGTTG ATTTTCGTGA AATCGATTAT ACCCGCCCTA CCTGTATTTT AATGGGTCAG
GAAAAAACCG GTATTTCACC AGAAGCGCTG GCACTGGCCG ATCAAGACAT CATCATTCCA
ATGATCGGCA TGGTACAGTC GCTGAATGTT TCCGTCGCTT CCGCGCTAAT TTTATATGAA
GCACAGCGGC AACGGCAGAA TGCCGGGATG TATAAACGGA CACACAGCGT TCTGGCAGAG
AGTGAGCAGC AACGGCTATT GTTTGAAGGG GGTTACCCGG TATTGGCACA CGTTGCCAAA
CGTAAAGGGC TCCCCCAACC TCATATTGAT GAACAAGGCC AAATCATTGC CGATGCGCAA
TGGTGGTCGG CCATGCAAGC CACGGAGTCT TAA
|
|---|
| Protein sequence | MNPQRYARIC DMLATRQPDL TVCLEQVHKP HNVSAIIRTA DAVGIHQVHA IWPTTQMYTR
LSAAAGSNSW VQVKTHPHIA DAIAYLKSQD MQILATHLSD KAVDFREIDY TRPTCILMGQ
EKTGISPEAL ALADQDIIIP MIGMVQSLNV SVASALILYE AQRQRQNAGM YKRTHSVLAE
SEQQRLLFEG GYPVLAHVAK RKGLPQPHID EQGQIIADAQ WWSAMQATES
|
|---|
| |