Gene YpsIP31758_0022 details

Gene Information

• Locus tag: YpsIP31758_0022
• Symbol: engB
• ID: 5384325
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 25872
• End bp: 26522
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640862981
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_001399023
• Protein GI: 153948718
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.00273485
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCATCA GAAACTATAA CTATCATATG ACTCACTTCG TCATCAGTGC TCCGGATATT 
CGTCACCTAC CACGGGATGA AGGTATTGAA GTCGCATTCG CGGGCCGCTC AAACGCGGGT 
AAATCCAGTG CACTCAATAC ATTAACTAAC CAAAAAGGTT TAGCCAGAAC CAGTAAAACA 
CCGGGGCGAA CTCAGCTAAT TAACCTGTTT GAAGTGGTTG ATGGTGTCCG TCTAGTGGAC 
TTACCAGGTT ATGGCTATGC CGAAGTGCCT GAGGAGATGA AACTCAAGTG GCAACGTGCG 
CTGGGTGAAT ATTTGCAGAA ACGTAATTGT CTGAAAGGAT TAGTTGTGCT GATGGATATT 
CGTCATCCAT TGAAAGATTT GGATCAGCAG ATGATTACCT GGGCGGTCGC GGTCGGTACA 
CCGGTTCTTT TGCTGTTGAC CAAAGCGGAT AAGCTGGCAT CCGGTGCGCG TAAAGCACAA 
TTAAATCTGG TGCGAGAAGC TATCATCCCA TTTATGGGTG ATATTCAGGT CGAGGCATTC 
TCATCACTGA AAAAGATTGG TGTCGATAAG TTACGGGAAA AACTGGACAC CTGGTTTAGT 
GAGATCCCAC CAGAAGTTAT GGCTGAAGAG TTTGACGGCG AAGGCGAGTA A 

 

Protein sequence

MTIRNYNYHM THFVISAPDI RHLPRDEGIE VAFAGRSNAG KSSALNTLTN QKGLARTSKT 
PGRTQLINLF EVVDGVRLVD LPGYGYAEVP EEMKLKWQRA LGEYLQKRNC LKGLVVLMDI 
RHPLKDLDQQ MITWAVAVGT PVLLLLTKAD KLASGARKAQ LNLVREAIIP FMGDIQVEAF 
SSLKKIGVDK LREKLDTWFS EIPPEVMAEE FDGEGE