Gene YpsIP31758_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0008 
SymbolrbsK 
ID5386845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp8101 
End bp9027 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content50% 
IMG OID640862965 
Productribokinase 
Protein accessionYP_001399012 
Protein GI153949716 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0252287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAG GTAAGCTGGT GGTGTTGGGC AGTATCAATG CCGACCATAT TCTGAATATT 
GAGCAGTTTC CACGTCCGGG TGAAACGGTG ATCGGGCAGC AGTATAACGT TGCTTTCGGA
GGTAAAGGGG CTAATCAAGC GGTTGCTGCT GGCCGTAGCG GTGCGGATAT CGCATTTATT
GCCTGTGTGG GTGACGATGA TATTGGTGAA CGGGTGCGTC AGCAACTCAC TGCCGATAAG
ATTGATACTC AGCCTATCGA GGCTATTAAG GGGGCAACTA CCGGTGTGGC ATTGATCTTC
GTGAATAGCG ATGGCGAAAA TGTGATTGGT ATTAATGCGG GGGCTAACTC AGCGGTGACA
CCAGAGTATC TTCGCCGCTA CCAACAACAA GTGATCGATG CTGATGCACT CTTAATGCAA
CTGGAGTCGC CGCTCGACAC TGTTATTGCG GCCGCTAAAC TGGCGAAGCA GCATCAAACT
CAGGTTATCC TCAATCCGGC ACCCGCCCGT AAATTACCCG ATGAATTATT AACTCTGGTC
GATATGATTA CGCCTAATGA AACGGAAGCC GAGCGTTTGA CCGGCATTCA TATTGAGCAG
GATGATGATG CCGCGAAAGC AGCGCAAATT TTGCATGATA AAGGCATTGC TACCGTGATC
ATCACCTTAG GTAGCCGTGG CGTATGGCTC AGTGAACAAG GTAAAGGTAA ATTAGTGGCG
GGGTTCAAGG TAAATGCCGT AGATACCATT GCTGCCGGTG ATACGTTTAA CGGTGCATTA
TTGACAGCGT TATTAGAAGG CCAGTCTATG GATGTCGCAG TGCGTTTTGC TCATGCCGCG
GCGGCTATTG CGGTCACTCG GCCTGGAGCA CAGCCGTCCA TTCCATGGCG TGCCGAAATT
GATAGCTTCT TACAAGAACG AGTGTAA
 
Protein sequence
METGKLVVLG SINADHILNI EQFPRPGETV IGQQYNVAFG GKGANQAVAA GRSGADIAFI 
ACVGDDDIGE RVRQQLTADK IDTQPIEAIK GATTGVALIF VNSDGENVIG INAGANSAVT
PEYLRRYQQQ VIDADALLMQ LESPLDTVIA AAKLAKQHQT QVILNPAPAR KLPDELLTLV
DMITPNETEA ERLTGIHIEQ DDDAAKAAQI LHDKGIATVI ITLGSRGVWL SEQGKGKLVA
GFKVNAVDTI AAGDTFNGAL LTALLEGQSM DVAVRFAHAA AAIAVTRPGA QPSIPWRAEI
DSFLQERV