Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0008 |
Symbol | rbsK |
ID | 5386845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 8101 |
End bp | 9027 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640862965 |
Product | ribokinase |
Protein accession | YP_001399012 |
Protein GI | 153949716 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0252287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAG GTAAGCTGGT GGTGTTGGGC AGTATCAATG CCGACCATAT TCTGAATATT GAGCAGTTTC CACGTCCGGG TGAAACGGTG ATCGGGCAGC AGTATAACGT TGCTTTCGGA GGTAAAGGGG CTAATCAAGC GGTTGCTGCT GGCCGTAGCG GTGCGGATAT CGCATTTATT GCCTGTGTGG GTGACGATGA TATTGGTGAA CGGGTGCGTC AGCAACTCAC TGCCGATAAG ATTGATACTC AGCCTATCGA GGCTATTAAG GGGGCAACTA CCGGTGTGGC ATTGATCTTC GTGAATAGCG ATGGCGAAAA TGTGATTGGT ATTAATGCGG GGGCTAACTC AGCGGTGACA CCAGAGTATC TTCGCCGCTA CCAACAACAA GTGATCGATG CTGATGCACT CTTAATGCAA CTGGAGTCGC CGCTCGACAC TGTTATTGCG GCCGCTAAAC TGGCGAAGCA GCATCAAACT CAGGTTATCC TCAATCCGGC ACCCGCCCGT AAATTACCCG ATGAATTATT AACTCTGGTC GATATGATTA CGCCTAATGA AACGGAAGCC GAGCGTTTGA CCGGCATTCA TATTGAGCAG GATGATGATG CCGCGAAAGC AGCGCAAATT TTGCATGATA AAGGCATTGC TACCGTGATC ATCACCTTAG GTAGCCGTGG CGTATGGCTC AGTGAACAAG GTAAAGGTAA ATTAGTGGCG GGGTTCAAGG TAAATGCCGT AGATACCATT GCTGCCGGTG ATACGTTTAA CGGTGCATTA TTGACAGCGT TATTAGAAGG CCAGTCTATG GATGTCGCAG TGCGTTTTGC TCATGCCGCG GCGGCTATTG CGGTCACTCG GCCTGGAGCA CAGCCGTCCA TTCCATGGCG TGCCGAAATT GATAGCTTCT TACAAGAACG AGTGTAA
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Protein sequence | METGKLVVLG SINADHILNI EQFPRPGETV IGQQYNVAFG GKGANQAVAA GRSGADIAFI ACVGDDDIGE RVRQQLTADK IDTQPIEAIK GATTGVALIF VNSDGENVIG INAGANSAVT PEYLRRYQQQ VIDADALLMQ LESPLDTVIA AAKLAKQHQT QVILNPAPAR KLPDELLTLV DMITPNETEA ERLTGIHIEQ DDDAAKAAQI LHDKGIATVI ITLGSRGVWL SEQGKGKLVA GFKVNAVDTI AAGDTFNGAL LTALLEGQSM DVAVRFAHAA AAIAVTRPGA QPSIPWRAEI DSFLQERV
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