Gene JJD26997_1988 details

Gene Information

• Locus tag: JJD26997_1988
• Symbol: exbD
• ID: 5389762
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: +
• Start bp: 1752417
• End bp: 1752827
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 640862851
• Product: biopolymer transport exbD protein
• Protein accession: YP_001398907
• Protein GI: 153952038
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02804] TonB system transport protein ExbD, group 2

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTATAA GGCACATAAA AATGCTTAAA CTACCAAAAA ATGAAGGTTT AAATATAGTT 
CCATTTATAG ACATTATGCT TGTTTTGCTT GCTATAGTGC TTAGTATTTC AACCTTTATT 
GCACATGGAA AAATTCAAAT CTCACTTCCT TCAAGTGAAA ATGCTACCAA TATAAGCAAT 
AATGAAAAAA AACTTCTTAT AACCATAGAC GAAAAAAATA CTTTTTATTT AAATGATAAA 
TTAGCTGATT TAAATGAAGT TCAAAATGCT ATTTTTTCAC TTGATAAAAA AACTATAGTA 
GAATTAAAAA GCGACAAAAA TGCTAAATTT GAAAGCTTTG TAAAAATTAT AGATTTTTTA 
AAAGCCAAAG AACATGAAAA TTTTCAGATT ATTACTGAGA AAAACAAATG A 

 

Protein sequence

MLIRHIKMLK LPKNEGLNIV PFIDIMLVLL AIVLSISTFI AHGKIQISLP SSENATNISN 
NEKKLLITID EKNTFYLNDK LADLNEVQNA IFSLDKKTIV ELKSDKNAKF ESFVKIIDFL 
KAKEHENFQI ITEKNK