Gene JJD26997_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1948 
SymbolrpoA 
ID5390577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand+ 
Start bp1720094 
End bp1721107 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content32% 
IMG OID640862815 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_001398875 
Protein GI153951055 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.156283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATA TTACAATATC TGCTTATACG CCAACAGAAT TTACAATAGA AAACATTAGT 
GATACTGTGG CTAAAATCAG TGCTTGGCCT TTTGAGATTG GCTATGGAAT CACCCTAGCC 
CATCCTTTAC GCCGTTTGCT TTATACTAGT ACCGTAGGAT ATGCTCCAAC TGCGATTCAT 
ATTGATGGCG TAGCTCATGA ATTTGATAGC ATGCGTGGCA TGCTTGAAGA TGTAGCACTT 
TTTATCATTA ATCTAAAAAA ACTACGCTTT AAAATTAAAA GTGACTCAAA TAAAGAAATA 
GTAGAATTTA GCTTTAAAGG CTCAAAAGAA ATTTACGGCA AAGATCTAAA TAATGATCAA 
GTAGAAGTAG TAAATAAAGA CGCCTATCTG GCAACAATCA ACGAAGATGC TGAACTCGAA 
TTCACATTGA TTGTTGAAAA AGGTATTGGC TATATACCAA GCGAAGAAAT TAAAGAGTTT 
TTAAATGATC CTAAATTTAT AGCTTTAGAT GCTTTCTTTA CACCTGTAAG AGAAGCAACT 
TATGATATTG AAAAAGTTTT ATTTGAAGAT AATCCTGATT ATGAAAAAGT GGTTTTAACC 
GTAACAACTG ATGGACAAAT CACTCCAAAT GAAGCTTTTC AAAATGCTCT AGAAGCTATG 
TATAAACAAT TATCAGTATT TGATAAAATT ACCAATGTTA GAAGTGTAAT TAAAAATCAG 
GCAACAAGCA ATGAGTTAGA AAATACTAAA TTATTGCAAA ACATTACAGA TTTAAATTTA 
AGTGCTAGGA GTTATAATTG TCTTGAAAAA GCAGGAGTAG TTTACATAGG TGAGCTTGCT 
TTGATGAGTG TAAGTGAACT TGCAGGGCTT AAGAATTTAG GTAAAAAATC TCTTGATGAA 
ATTAAAAACA TCATGGAAAA CATAGGTTTT CCTGTGGGAA CTTCTAAGCT TAGCGATAAT 
AAAGAAATAC TTAAAAATAA AATCGCAGAA TTAAAAGCAC AAAACGAAGG ATAA
 
Protein sequence
MRNITISAYT PTEFTIENIS DTVAKISAWP FEIGYGITLA HPLRRLLYTS TVGYAPTAIH 
IDGVAHEFDS MRGMLEDVAL FIINLKKLRF KIKSDSNKEI VEFSFKGSKE IYGKDLNNDQ 
VEVVNKDAYL ATINEDAELE FTLIVEKGIG YIPSEEIKEF LNDPKFIALD AFFTPVREAT 
YDIEKVLFED NPDYEKVVLT VTTDGQITPN EAFQNALEAM YKQLSVFDKI TNVRSVIKNQ 
ATSNELENTK LLQNITDLNL SARSYNCLEK AGVVYIGELA LMSVSELAGL KNLGKKSLDE 
IKNIMENIGF PVGTSKLSDN KEILKNKIAE LKAQNEG