| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1874 |
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| Symbol | cas1 |
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| ID | 5390335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 1655232 |
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| End bp | 1656122 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640862760 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001398820 |
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| Protein GI | 153952137 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03639] CRISPR-associated endonuclease Cas1, NMENI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTACG ATGAAGCTTT TAAAACACTG CTTATTAGCT CTAATGCCAA GCTAAATTTA
GAGCTAAATC ATCTTGTGAT TAAGCAAGAT GAAAATATAG CCAAATTGTT TTTAAAAGAT
ATAAATATCA TCGTTTTAGA AAGCTTACAA ATAAGCATTA GTTCCGCACT TTTTAATGCC
TTTGCAAAGC ATAAAATTAT CTTATTAACC TGCGATGAAA CTCATAGTAT AAATGGTGTT
TTTACTCCTT TTTTAGGGCA TTTTCAAAGT GCAAAAATCG CAAAAGAGCA AATGAATGTA
AGTGCTCAAA AAAAGGCTAT TTTATGGCAA AAAATCATTA AAAATAAAAT CCTAAATCAA
GCCTTTATCT TAAAAAAACA CAATAAAATA GAGCAAAGCA ATGAGCTTAT AAATTTGGCT
AAAAAAGTAA GCTTAAATGA TAGTAAAAAT ATTGAAGCTG TTGCGGCGGC GCTTTATTTT
AAAACTTTGT TTGGTGCTTC TTTTTCAAGA GATGAGTTTT GCTTTGAAAA TTCTGCTTTA
AATTATGGCT ATGCAATCAT TAGGGCTTGT ATTATTAGAG CAGTTTGCAT AAGTGGGTTT
TTGCCTTGGC TTGGCATAAA GCACGATAAT ATTTATAATT CTTTTGCGCT TTGTGATGAT
TTGATAGAAG TGTTTAGGGC TAGTGTTGAT GATTGTGTTT TAAAGCTTAA GGGTGAAAGT
GAGTTTTTAA GCAAAGATGA CAAAAGAGCG TTGATTGGCA ATTTACAAAG CAAAATCAAT
TTTGATGGGC AAAATTATCC TTTAAACAGA GCGATAAATC ATTATGTGGC AAATTTTAAA
AATGCTTTAT TGTATGAAGA TGAACTAAAG ATAGTGAAAT TTGATGATTG A
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| Protein sequence | MSYDEAFKTL LISSNAKLNL ELNHLVIKQD ENIAKLFLKD INIIVLESLQ ISISSALFNA
FAKHKIILLT CDETHSINGV FTPFLGHFQS AKIAKEQMNV SAQKKAILWQ KIIKNKILNQ
AFILKKHNKI EQSNELINLA KKVSLNDSKN IEAVAAALYF KTLFGASFSR DEFCFENSAL
NYGYAIIRAC IIRAVCISGF LPWLGIKHDN IYNSFALCDD LIEVFRASVD DCVLKLKGES
EFLSKDDKRA LIGNLQSKIN FDGQNYPLNR AINHYVANFK NALLYEDELK IVKFDD
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