Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1780 |
Symbol | kpsE |
ID | 5390190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1566279 |
End bp | 1567397 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640862674 |
Product | capsular polysaccharide ABC transporter |
Protein accession | YP_001398735 |
Protein GI | 153952331 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3524] Capsule polysaccharide export protein |
TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA ATAAAACTTT ACTGGAAAAA ATCAAAGATT TAAGCATATT TGATTCTTTT AAAATTGTTT GGTTTATAAT GATTTTTGTT GTGATTTATT ATACATTGAT TGCAGCACCA AGATATGTAA GCACGATGAT TTTAGATGTT AGATCAATAA GTGGAGAAAG TGCTCAAACA AGTGGAATTT TATCCTTGCT TGGTAGTACT TCCACAGCCA GTGAAGACAT TAAGTATTTA AAGGGCTATA TCTTATCAAG CGATATGCTA AAAACCTTAG ATGAAAAAAT TGGACTAAGA AGTCTTTATC AAGAACAACA CATCGATTTG CCTTTTAGAA TTTGGGACTC AAGCTCTATG GAAAGCTATC TTAAGTATTA CCAAGCAAGG GTTAAGCTGC ATTTAGATAA AAATAGCGGA CTTTTAAAGA TAGAAGTAGA AGCATTCACC CCCGAATCAG CCCATTTAAT AGCCCAAAAT ATTATGCAAG AAAGTGAAAA ATTCATCAAT GAAATTTCAC ATAAGTCAGC TAGAGAACAA ATGGCTTTTG CTGAAAACGA AGTACAAAAA TATAAAGAAC GCTATCGAAA GGCACAAAAT GATTTGATTG CTTTTCAAAA TAAGTACGGA GTTTTTGACC CTTTAAAGCA AGCTGAAACT AAAGCAAGTT TGGTTGCACA GATTGAAGCC AATTTAGCTC AAAAAGAAGC CAAACTTTTA ACTTTGCAAA GTTATATGAA TGATGCAGCA CCTGAAGTAG TAGCACTTAA AGCAGAAATT GAAGCGATCA AAAAACAACT TTTAAGAGAA AAATCTAAAA TTTCAGCTAA TAATACTTCT CAAAAGCTTA ATGATTTGGC TGCTAAATTT CAGGATTTAA CCATTGAAAC TACTTTTGCA CAAAAAGCTT ATGAAGCAGC TTTAAAAGCT TATGAAAGTG CTAGAATAGA AGCATTAAGA AAAATAAAAC AACTTGTAAT CATCCAAAGT CCAGATATTC CAGAAAGCGC AAAATATCCT GAAAGAATTT ATGATATTTT AACAGCGTTT ATTGTATTAT CTTTGATTTT TGGGATTGTT AAATTTATTA AAATGATAAT AGAGGAGCAT AAGTATTAA
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Protein sequence | MKENKTLLEK IKDLSIFDSF KIVWFIMIFV VIYYTLIAAP RYVSTMILDV RSISGESAQT SGILSLLGST STASEDIKYL KGYILSSDML KTLDEKIGLR SLYQEQHIDL PFRIWDSSSM ESYLKYYQAR VKLHLDKNSG LLKIEVEAFT PESAHLIAQN IMQESEKFIN EISHKSAREQ MAFAENEVQK YKERYRKAQN DLIAFQNKYG VFDPLKQAET KASLVAQIEA NLAQKEAKLL TLQSYMNDAA PEVVALKAEI EAIKKQLLRE KSKISANNTS QKLNDLAAKF QDLTIETTFA QKAYEAALKA YESARIEALR KIKQLVIIQS PDIPESAKYP ERIYDILTAF IVLSLIFGIV KFIKMIIEEH KY
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