| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1645 |
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| Symbol | fliF |
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| ID | 5390477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 1454357 |
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| End bp | 1456039 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640862574 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001398635 |
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| Protein GI | 153951308 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.01251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTA AAAATATGCT TTATCAAATT GGGCAGCTTT ATCAAAATTT AACTCGCAAG
CAGCGTATAG TGATTGCTAC ATCTATTGTA GTAGTGGTTG GGTTTTTGGT TTTTTTAGCT
TTATTTCGTG GAAGTGGTAG TAATGCAAAT AATGGATATG CAGTTTTAGT TGAAAATGTA
AGCCCAAGTT CTTCTGCTGC AATTGTAGCC AAACTTGAAC AAAATAATAT TCCCTATAAA
TTAGAAAGTG AAAATAAAAT TTTAGTTCCA CAAGATCAGA TTTATCGTCA AAGAATGTTT
ATTGCAAGCG AAGGTTTTAT AAAAGATAGT CGCGTGGGTT TTGAAGCTTT TGATACTCAA
GCTTTTGGAG CTACAAATGA AGAGCAAAAG GTAAAATACC AAAGAGCCAT AGAAGGCGAA
CTTGCAAGAA CTATCGAGAC TTTAGAGCCT ATTCGTAGCG CTGTTGTACA CATAGCATTT
CCTAAAGATA GTGTTTTTAC TGAAAGGCAA ATTCCGCCTA CAGCTTCAGT TGTTGTTAAT
GTTCGCGAAG GCTTGAAGCT TACTAGAAAA CAAATTGATG GTATAAAAAA TATTGTTTCA
GCAGCAGTTC CAAAACTTAC TAAAGAAAAT GTTAAGATTA GTGATCAAAG TGGTGTGCCT
TTAGATGAGC AAGAAGCATA TGAAGATGAC TTGGTTCGTG CGCAAATTAA ATTTAAAAGT
GATCAAGAAA AAGCTTTAGA AGATAAGATT ATAGAAAACT TAGCTCCTTT TGCAGGTGGC
ATGGATAAAG TAAAAGTGAG TGTAAATATA GATTTTGATT TTTCCAAGCA AGAATCTCAA
AGTGAAATTT ATGATCCAAA TCCTATAGTG CGTAGTGAGC AAACTTTAAA CGAAGAAAGG
ACAGGTAGAA AAGATCCGGA AATTCAAGGT GTTCCAGGTG CTGTTTCTAA TATAGGTCCT
GTTGAAGGAC TTGACAATAA GGGTCAAATT GACACTTATA AAAAAAATCA AGTTACTACA
AATAATGAAC TTTCTAAAAC TATTACAAAT ATCAAAAAAC AATTTGCAAC AGTTTTACGC
ACTTCAGCAG CTGTTACTAT AGATGGAAGA TATCAAGATG TGGTTGATGA AAATGGGGAT
GTGAAAAGCG AATATGTTCC ATTGACCAAA GAAGAGCTTG CAAGTGTTGA GAGTATAGTT
AAAAATGCTA TTAATTTTAG CGCTACTAGA GGTGATAGTG TTGTAGTGCA AAATTTACCA
TTTCATCGTG AGTCGATTAG AGTTGAAAGT AAAGTTAAAA CTTTTTACAA TCGTTTTGTT
GAGCCATTTA TTCCACCAGT TAAGTATTTT ATTGCAGCGA TTTTACTTTT TATTTTTTAC
AAAAAAGTCA TTGCTCCATT TACTCAAAAA ATGCTTGAAG ATGTCGCAGC GCAAGAAGAA
ATGCAGCAAG GTCCAAACGC TGTTTTAGAT GATGCTGAAG ATGCTTTGGA GAAATTTAAT
GCAGTAAAGA AAAAGGTTGA AGAACAACTT GGTTTTGGAG ATAATTTCAA TGAAGATTCT
ATTCAATATG AGGTTTTGCT TGAAAAATTG CGCGGTTTAG TAAGTGATAA AGGCGAGGAA
ATTGCAGCAC TTTTACAAAA CTTAATTCAA AATGATAGTG AATTTGGCGA AAAGGATATG
TGA
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| Protein sequence | MDFKNMLYQI GQLYQNLTRK QRIVIATSIV VVVGFLVFLA LFRGSGSNAN NGYAVLVENV
SPSSSAAIVA KLEQNNIPYK LESENKILVP QDQIYRQRMF IASEGFIKDS RVGFEAFDTQ
AFGATNEEQK VKYQRAIEGE LARTIETLEP IRSAVVHIAF PKDSVFTERQ IPPTASVVVN
VREGLKLTRK QIDGIKNIVS AAVPKLTKEN VKISDQSGVP LDEQEAYEDD LVRAQIKFKS
DQEKALEDKI IENLAPFAGG MDKVKVSVNI DFDFSKQESQ SEIYDPNPIV RSEQTLNEER
TGRKDPEIQG VPGAVSNIGP VEGLDNKGQI DTYKKNQVTT NNELSKTITN IKKQFATVLR
TSAAVTIDGR YQDVVDENGD VKSEYVPLTK EELASVESIV KNAINFSATR GDSVVVQNLP
FHRESIRVES KVKTFYNRFV EPFIPPVKYF IAAILLFIFY KKVIAPFTQK MLEDVAAQEE
MQQGPNAVLD DAEDALEKFN AVKKKVEEQL GFGDNFNEDS IQYEVLLEKL RGLVSDKGEE
IAALLQNLIQ NDSEFGEKDM
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