Gene JJD26997_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1577 
SymbolpyrF 
ID5390275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand+ 
Start bp1394415 
End bp1395095 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content30% 
IMG OID640862515 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001398576 
Protein GI153951680 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT GTGTCGCACT TGATCTTTCT ACAAAAGAAG AATGCTTGCA ACTTACTAAA 
GAATTAAAAA ATTTAGACAT ATGGTTAAAA GTAGGTTTAA GAGCATATTT AAGAGATGGC 
TTTAAATTCA TAGAAGAACT TAAAAAAGTT GATGATTTTA AAATATTTCT TGATCTTAAA 
ATTCATGATA TTCCCAACAC TATGGCAGAT GCTTGCGAAG AAATATCAAA ACTTGGTATT 
GATATGATCA ATATCCACGC AAGTGCTGGA AAAATAGCCA TGCAAGAAGT TATGACACGG 
CTTAGCAAAT TTTCAAAAAG ACCTTTAGTT TTAGCAGTTT CTGCTCTTAC AAGTTTTGAT 
GAAGAAAATT TCTTTAGTAT TTATAGACAA AAAATCGAAG AAGCTGTAAT TAATTTTTCA 
AAAATATCCT ATGAAAATGG ACTTGATGGT ATGGTATGCT CTGTTTTTGA AAGTAAAATC 
ATCAAAGAAC ACACTCAAAA AAACTTTCTA ACTCTCACTC CAGGAATTCG TCCTTTTGGA 
GAAAAAAATG ATGATCAAAA ACGTGTCGCT AATTTAACAA TGGCTAGAGA AAATTTAAGC 
GATTTTATAG TAGTTGGACG TCCTATTTAT AAAGATAATA ACCCTAGAAA AATTTGTGAA 
AAAATTCTAC AAGAAATTTA A
 
Protein sequence
MKLCVALDLS TKEECLQLTK ELKNLDIWLK VGLRAYLRDG FKFIEELKKV DDFKIFLDLK 
IHDIPNTMAD ACEEISKLGI DMINIHASAG KIAMQEVMTR LSKFSKRPLV LAVSALTSFD 
EENFFSIYRQ KIEEAVINFS KISYENGLDG MVCSVFESKI IKEHTQKNFL TLTPGIRPFG 
EKNDDQKRVA NLTMARENLS DFIVVGRPIY KDNNPRKICE KILQEI