Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1556 |
Symbol | lysS |
ID | 5389363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1375940 |
End bp | 1377445 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640862496 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001398557 |
Protein GI | 153951744 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGATA ATATTTTAGA ACAACAAAGA ATAGAAAAAG CTAAAGAGTT AAAAAATTTA GGAATCAATC CTTATCCTCA TTTTTTAGAA AAGGAAATGT CTTTAAAGAC TTTTAAGGAT AAATTTTCTT ATATTTTAGA GCAAGTTGAA AAAAGAGATG AAAGTGTCAA TGCTGTTGTT GCAGGACGTT TGAAACTTTT GCGTATAGCT GGGAAATCGA TTTTTGCAAA CATTGAAGAT GAGGATACAA ATTTACAAAT TTATTTTAGT AAAGATAGCG TAGGCGAAGA ACTTTATACG ATTTTAAAAA AGAATTTAGA GGCGGGTGAT ATTGTTTTGG TTAAAGGTTT TCCTTTTGTA ACTAAAACAG GTGAGTTTAG TTTGCATGCA AGCGAAGTAA AACTTGCTAC AAAAGCTATT GTTCCTTTAC CTGAAAAATA TCATGGATTA ACAGATATTG AGCAAAGATA TCGCAAACGT TATGTTGATA TGATAATGAA TGCCGAAGTT AGAAAAGATT TTTTAGTGCG TTCTAAAGTG GTGAGTTTAA TCCGTCATTT TTTTGAAAAT AAAGGCTTTT TAGAAGTAGA AACTCCTATG ATGCATCCGA TTGCAGGTGG AGCAAACGCT AAACCTTTTG TAACTTTTCA TAATTCTTTA GGTGTAGAAA GATTTTTAAG AATTGCTCCA GAACTTTATC TTAAAAGACT TGTAGTGGGT GGTTTTGAGG CAGTTTTTGA AATCAATCGT TGTTTTAGAA ATGAAGGTAT GGATTTAACT CATAATCCCG AATTTACAAC TATAGAATTT TATTGGGCTT ATCATAATTA TAAAGATTTA ATGGATTTAA CTGAAGAACT TTTTGCTTTA CTTTTGGATA AACTTAATCT AGGAAAAACA ATAGAATTTG ATGGAAAAAT GATAGATTTT TCTAAACCTT TTGAAAGAAT AACCTATAAA GACGCACTTT GTAAATATGG TGGTTTAGAT AGGGATTTAA TCGAAGATAA AGAAAAAATT CTTGCCAAAT TAAAAACAGA CGGTTTTGAA GCGAACGAAA AGCTTGAACT TGGACATTTG CAAGCTGAAC TTTTTGATAA TTACGTGGAA GAAAAATTGA TCAATCCTAC TTTTGTGAGT GATTTTCCTA TTTCTATAAG TCCTTTATCA AGACGTAGCG ATGAGAATTC TCAGATTGCT GAAAGGTTTG AGCTGTTTAT TTGCGGAAGA GAATTGGCAA ATGGTTTTAA TGAGCTTAAT GATCCGCTTG ATCAATATGA GAGATTTTTA AAACAAATTG AAGCTAAAAA TGCAGGCGAT GAAGAGGCTT GTGAAATGGA TGAAGATTTT GTAAATGCTT TGGGTTATGG AATGCCTCCA ACGGCAGGGC AGGGCATAGG CATAGATAGA CTTGTTATGC TTTTGACAAA TAAAAAATCT ATTCGAGATG TGATATTGTT TCCTGCAATG CGTCCATTAA AATCAGAACT AAAGGAGAAA GAATGA
|
Protein sequence | MFDNILEQQR IEKAKELKNL GINPYPHFLE KEMSLKTFKD KFSYILEQVE KRDESVNAVV AGRLKLLRIA GKSIFANIED EDTNLQIYFS KDSVGEELYT ILKKNLEAGD IVLVKGFPFV TKTGEFSLHA SEVKLATKAI VPLPEKYHGL TDIEQRYRKR YVDMIMNAEV RKDFLVRSKV VSLIRHFFEN KGFLEVETPM MHPIAGGANA KPFVTFHNSL GVERFLRIAP ELYLKRLVVG GFEAVFEINR CFRNEGMDLT HNPEFTTIEF YWAYHNYKDL MDLTEELFAL LLDKLNLGKT IEFDGKMIDF SKPFERITYK DALCKYGGLD RDLIEDKEKI LAKLKTDGFE ANEKLELGHL QAELFDNYVE EKLINPTFVS DFPISISPLS RRSDENSQIA ERFELFICGR ELANGFNELN DPLDQYERFL KQIEAKNAGD EEACEMDEDF VNALGYGMPP TAGQGIGIDR LVMLLTNKKS IRDVILFPAM RPLKSELKEK E
|
| |