Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1493 |
Symbol | |
ID | 5388904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1324206 |
End bp | 1326299 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640862447 |
Product | putative TonB-dependent receptor |
Protein accession | YP_001398515 |
Protein GI | 153951362 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.404893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTCAAA TTAAAAATAT GAAATTTAAA AAAAGTTTAC TGTGTTTTTT AATTTTATCT GGAGCTTTAT TACAAGCAGA AGAAACATAT CAACTTAATG ATGTTGTGGT TAGCGCTAGT GGTTTTGAAC AAGATTTGGT TGATGCGCCT GCTAGTATTT CTATCATTAC AAAAGAAGAG CTTGAAAAAA AGCCAATTAA GGATATAGGG GAGGCTATAG GAGATATTCC AGGTGTAGAT GTGACTATGG ATAAAACAGG CACTTATGAT TTTAGCATAC GAGGTTTTGG TAGTTCTTAT ACTCTAGTTT TAATTGATGG AAAACGTCAA AGTGTTGCAA ATGGGTTTTA TACTAATGTT TTTAAAGGCA GTGAGTCAGG ATATCTGCCG CCTTTATCTA TGATAGAGCG TATCGAGGTT ATACGTGGTC CAGCTTCTAC ACTTTATGGC AGTGATGCTG TAGGCGGTGT GATAAATATT ATCACCAAGA AAAATCCTGA TAAAATCGAA GCAAATATAG AATTTAATAC TCTTTTGCAA CAGCACTCTA ATCACTATGG CAATGCTGGG GGATTTAACG CTTATGTAGC AACTCCTTTG ATTGAAGATA CATTATCAAT TTCTGCAAGG TTGAAGTATT ATGATAAGGC AGCTTCTGAT TTAAAATGGC CTACACCGGT TTGGAATAAT AACAATCAAA AACCTGATAA TTATCAACAA AGACCTGATA ATTACCAAAT TGCTATTCAT AGTCCAGGTG CTTTTACTAG CTTAGGTTTT GGTTCTAGGC TTAATTGGAC AGTAGATGAT AAAAATAATA TATATTTTGA TATAGAGCGA TATATTAATG AAATTTCAGT GAATTCTATA AGTAGTAGGG CTATTAAAAG CGAAAAACAA CTTTTTAAGG ATAATATTGT TTTAAATCAT GATGGTAACT ATGATTTTGG TTCAACTAAC TCATATTTAC AATATGGTAG CACTAAGGAT AAGGAATTAC ATAGTCAAAT TTGGGTAGGA GAAGGTAAGG TTGTTTTACC TTGGAATTTA GGTCAATACG GTAATTTAGT AAATACCTTT GGTGCAAGGA TTGATTATGA GATGTTAAAA AATGATCAAG CAAGCGCAGG TAGTCAAATA AGAGGTAAAA ATCTTGATCA AACCACGGTT GCACTTTATG GGGAAAATGA GTATTTTATA ACTGATGATT TGATTTTTAC TACAGGTTTG CGTTATATTT ATAGCAATTT GTTTGATTCT GAATTTACCC CTAGGATTTA TTTGGTTTAT CACTTAAATG ATAATATAGC CTTTAAAGGA GGTGTTTCAA AAGGCTATAA AACTCCTTCT GCCAAGCAGT TGACAAATGG ATATTATAAT TATGCCAATG GTAATGCTCA TTTTGGAAAC CCTGACTTAA AACCAGAAGA AAGTATAAAT TATGAATTGG GTGCTGATTT TAGGGTATTT GATTTTGCAC ATTATTCTAT CACAGGATTT ATTACTGATT TTACAAATCA AATCAGTAGT GAATATTTAA CAGGTATGCA AAATGGTATT AATTGTAGCA ATGGCACTGT TTGTAAGCGT CCTATTAATC TTGGAAAAAC ACAGACTAAA GGTATAGAAT TTGCATTTAA TACCAAAACT TACAATGGTT TTAGCCTAAA TTCAAGTTAT ACTTTTATGG ATAATCGCTA TAAAGATAGT CAAAAAAATT GGTTTGGTGG TGATAGAATA GAAAATTTAC CAAGGCATAT AGCAATGTTA AAATTAAACT ATGAGCGAGG TAAATTTAAT TCCTATATAA AAACACGAGC AAGACTCGAT ACTGTAGCTA AAGCAAGAGT TGGTGGTAAT GGTAGTTTGC CATGGCAAAA ATATAAGCCT TTTTATATAG TAGATTTAGG GATAAATTAT AAAATCAATA AGCAATCCAG CTTAAGTTTT GCAGTGCAAA ATCTTTTTGA TAAAAATTTC TTTGATCCGC AAGTTACTAA ATGGGCTGGA GCCAATCCTG CTGGCTATGC AAATCGTTAT CAAGACTATA CAGAAGGAAG GAGTTTTTGG TTGAGTTATA AATATGATTT TTAA
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Protein sequence | MTQIKNMKFK KSLLCFLILS GALLQAEETY QLNDVVVSAS GFEQDLVDAP ASISIITKEE LEKKPIKDIG EAIGDIPGVD VTMDKTGTYD FSIRGFGSSY TLVLIDGKRQ SVANGFYTNV FKGSESGYLP PLSMIERIEV IRGPASTLYG SDAVGGVINI ITKKNPDKIE ANIEFNTLLQ QHSNHYGNAG GFNAYVATPL IEDTLSISAR LKYYDKAASD LKWPTPVWNN NNQKPDNYQQ RPDNYQIAIH SPGAFTSLGF GSRLNWTVDD KNNIYFDIER YINEISVNSI SSRAIKSEKQ LFKDNIVLNH DGNYDFGSTN SYLQYGSTKD KELHSQIWVG EGKVVLPWNL GQYGNLVNTF GARIDYEMLK NDQASAGSQI RGKNLDQTTV ALYGENEYFI TDDLIFTTGL RYIYSNLFDS EFTPRIYLVY HLNDNIAFKG GVSKGYKTPS AKQLTNGYYN YANGNAHFGN PDLKPEESIN YELGADFRVF DFAHYSITGF ITDFTNQISS EYLTGMQNGI NCSNGTVCKR PINLGKTQTK GIEFAFNTKT YNGFSLNSSY TFMDNRYKDS QKNWFGGDRI ENLPRHIAML KLNYERGKFN SYIKTRARLD TVAKARVGGN GSLPWQKYKP FYIVDLGINY KINKQSSLSF AVQNLFDKNF FDPQVTKWAG ANPAGYANRY QDYTEGRSFW LSYKYDF
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