Gene JJD26997_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1488 
Symbolrpe 
ID5389532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand- 
Start bp1321011 
End bp1321658 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content32% 
IMG OID640862443 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001398511 
Protein GI153950960 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGTAG CTCCAAGTTT ATTGTCTGCA AATTTTTTAA AATTAGAAGA AGAAGTTAAA 
GCTATTGAAG CTGCAGGTGC AGATCTTTTA CATATTGATG TAATGGATGG ACACTTTGTT 
CCAAATTTGA CTTTTGGGCC TTGCGTGATC GAAAAAATTT CAACTATTAG CAAGGTGCCA 
TTAGATGTGC ATTTAATGGT TAAAGATGTA AGTAAATTTG TGGATTTATT TATCCCTTTG 
AAACCAAAAT TCATTTCTTT TCATATGGAA AGTGAAGCCC ATCCTATAAG GCTTTGTGAC 
TATATAAGAA GTCAAGAAAT CCATCCTGCC ATTGTTTTAA ATCCACACAC TCCTATTGAT 
TCTATTAAAC ACATGCTAGA GTTTGTAGAT ATGGTGCTTT TAATGAGCGT TAATCCTGGG 
TTTGGTGGGC AAAAATTTTT ACCTTTGGTA CATGAAAAAA TCAAAGAATT ACGCCAAATG 
ATTGATAAAA AAAATGCTAA AGTTTTTATA GAAGTTGATG GTGGTGTTAA TGGCTTAAAT 
GCTAGCGATT TAGAAGAATC TGGAGCTGAT ATTTTGGTGG CTGGAAGTTA TATTTTTTCT 
TCTAATGATT ATAAAACTGC AATTTCATCT TTAAAGCTTG AATTTTGA
 
Protein sequence
MYVAPSLLSA NFLKLEEEVK AIEAAGADLL HIDVMDGHFV PNLTFGPCVI EKISTISKVP 
LDVHLMVKDV SKFVDLFIPL KPKFISFHME SEAHPIRLCD YIRSQEIHPA IVLNPHTPID 
SIKHMLEFVD MVLLMSVNPG FGGQKFLPLV HEKIKELRQM IDKKNAKVFI EVDGGVNGLN 
ASDLEESGAD ILVAGSYIFS SNDYKTAISS LKLEF