| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1459 |
|---|
| Symbol | rplA |
|---|
| ID | 5389277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 1300789 |
|---|
| End bp | 1301490 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640862415 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_001398488 |
|---|
| Protein GI | 153952002 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000386293 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGA TAGCAAAAAG ATTAAAAGAA TTATCACAAA AAATTGATTC AAATAAAGAG
TATGCTTTAA GCGATGCAAT TGATACAATA AAGACTTTAA AGTCTGCTAA ATTTGATGAG
ACTGTAGAAA TTGCTTTAAA ACTTAATGTT GATCCAAGAC ATGCAGATCA AATGGTAAGA
GGATCTGTTG TTTTACCTGC TGGAACGGGT AAAAAAGTTC GCGTTGCTGT AATTGCAAAA
GACGCAAAAG CTGATGAAGC GAAAAATGCT GGTGCAGATA TTGTGGGTAG CGATGATTTA
GTAGAAGAAA TTCAAAAAGG TAATATGAAT TTTGATGTTT TGATTGCTAC TCCAAATTTA
ATGGGACTTG TTGGTAAAGT TGGTAGAATT TTAGGGCCAA AAGGTTTAAT GCCAAATCCT
AAAACTGGAA CAGTAACTAT GGATGTTGCT CAAGCAGTTA ATAATGCAAA AAGTGGTCAG
GTAAATTTCC GTGTTGATAA GCAAGGAAAT ATCCATGCAG GTCTTGGTAA AGTAAGTTTT
TCCAAAGAAC AATTATGGGA TAATGTTAGC ACTTTTGTAA AGGCAATCAA CAAACACAAA
CCTGCTGCAG CTAAAGGTAG ATATATTAAA AATGCGGCTT TATCTTTGAC AATGAGCCCT
TCTGTAAAGC TTGAAACACA AGAATTACTT GATATGAAAT AA
|
|---|
| Protein sequence | MAKIAKRLKE LSQKIDSNKE YALSDAIDTI KTLKSAKFDE TVEIALKLNV DPRHADQMVR
GSVVLPAGTG KKVRVAVIAK DAKADEAKNA GADIVGSDDL VEEIQKGNMN FDVLIATPNL
MGLVGKVGRI LGPKGLMPNP KTGTVTMDVA QAVNNAKSGQ VNFRVDKQGN IHAGLGKVSF
SKEQLWDNVS TFVKAINKHK PAAAKGRYIK NAALSLTMSP SVKLETQELL DMK
|
|---|
| |