| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1449 |
|---|
| Symbol | |
|---|
| ID | 5389906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 1285889 |
|---|
| End bp | 1286677 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640862409 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001398482 |
|---|
| Protein GI | 153951106 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA AAATTAAAAA TAAGGTTTGT ATTATTACAG GAGGGGCTAA AGGTATTGGG
TATGGTATTG CTAAATTATG GGCAAGTGAA GGTGGAATTC CTGTAATTTT TTCAAGATCT
ATGCCTAAAG AACATGATAA AGAATTAAAA AATTTATGCA GTAGGTATGA ATTTTATGAA
ATTGATTTAA AAAATTATGA GCAAATTGAA GAGCTTGTAA AAAAAGTTGC TATAAAACAT
AGTGGAATTT ACGCGCTTGT AAATAATGCA GGTGCAAATG ATAATTTACA TATTGAAAAT
ACAAGTACTC AAGATTTGAT AAAATCTTAC GAAAATAATC TTTTTCATTA TTATACTATG
ACAAAAGAAT GTTTGCCTTA CATTAAAAAA GAACAAGGCA GTATTTTAAA TATAGTCAGT
AAAACAGGCA TCACAGGACA AGGAAGAACT TCAGCTTATG CTTCAGCCAA AGCTGCTCAA
ATGGGTTTTA CTAGAGAATG GGCTTGTGCT TTTGCTAAAG ATAATGTTAG GGTAAATGCT
ATAGCTCCTG CTGAAGTTAT GACTCCTCTT TATGAAAAAT GGCTACAAAA TTTTCCTAAT
CCTAAAGATC AATATGAAAA AATTGCAAAA GCTATACCTT TAGGCCATCG TTTTACTACC
ATAGAGGAAA TTGCAAATAC AGCGGTTTTT ACACTTAGCC CCCTTGCTTC ACATACTACA
GGGCAAATTT TAATGCCAGA TGGAGGTTAT GTGCATTTAG ATAGAGCATT AAATTGGGAT
GAAAACTAA
|
|---|
| Protein sequence | MDLKIKNKVC IITGGAKGIG YGIAKLWASE GGIPVIFSRS MPKEHDKELK NLCSRYEFYE
IDLKNYEQIE ELVKKVAIKH SGIYALVNNA GANDNLHIEN TSTQDLIKSY ENNLFHYYTM
TKECLPYIKK EQGSILNIVS KTGITGQGRT SAYASAKAAQ MGFTREWACA FAKDNVRVNA
IAPAEVMTPL YEKWLQNFPN PKDQYEKIAK AIPLGHRFTT IEEIANTAVF TLSPLASHTT
GQILMPDGGY VHLDRALNWD EN
|
|---|
| |