Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1420 |
Symbol | ctpA |
ID | 5389633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1256838 |
End bp | 1258172 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640862381 |
Product | carboxyl-terminal protease |
Protein accession | YP_001398455 |
Protein GI | 153951829 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.14041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAGC TTATTTTGAA AACAAAACGA TTTTTTGCGG GTCTTGCAGG CTTTGCCACT ACTTTTATTT TATGTCTATT TTTAATAAGT CATTTAGAAG CTAAAGTTGA TCGAAAAGAA GATCAGGTTC AAAAACGCCT AGAAGCTTTA GATAAGCTTA CAAAAACTCT TACTATAGTA GAGCAATACT ATGTGGATGA TCAAAATATC AGAGATTTAG TGGATAAATC TTTATCAGGG CTTTTAAGCA ATCTTGATGC ACATTCTTCT TTTTTAAATG AAAAAGATTT TAATGATATG AAAATTCAAA CCAATGGCGA ATTTGGTGGC CTTGGTATAA CCGTAAGTAT GAAAGATGGC GCTTTAACAG TTGTTTCTCC TATAGAAGGA ACACCAGCAG ATAAAGCAGG GATAAAATCA GGAGATATTA TTTTAAAAAT TAATGATGAG GCCACTTTAG GAATTAATCT CAATGATGCT GTAGATAAAA TGCGTGGTAA GCCAAAAACT CAAATCACTT TAACCATCTT TAGAAAAGGC GCAACAAAAC CTTTTGATGT TACACTTACA AGAGAAATTA TTAAGATAGA AAGTGTTTAT GCAAAAATGA TAGAAAATGA AAATATTCTT TATCTTAGAG TTACAAATTT TGATAAAAGT GTTGTAGATG TGGCAAGTAA AGAACTTAAA AAATATCCTA ATGTTAAAGG AGTTATTTTA GATCTTAGAA ATAATCCTGG TGGACTTTTA AATCAAGCCA TAGGACTTGT AAATTTATTT GTAGATAAAG GTGTTATTGT TTCTCAAAAA GGACGCATCG CAAGTGAAAA TCAAGAATAT AAAGCCGATC CTAAAAATAA AATTTCTAAT ACTTCTTTGG TTGTGCTTGT AAACGGTGGA AGTGCTAGTG CAAGTGAAAT CGTAAGTGGA GCTTTGCAAG ATCTTAAACG CGGTGTTATT GTGGGTGAAA ATACTTTCGG AAAAGGAAGT ATTCAACAAA TCATACCTAT TAATAAAACT GAAGCTTTAA GGCTTACTAT TGCAAGATAT TATCTTCCAA GCGGGCGTAC TATTCAAGCA GTGGGTGTAA AACCTGATAT TGAAGTTTTT CCAGGTAAAG TAAATACCCA AGAAGATGGT TTTTCTATAA AAGAAAGCGA CTTAAAACAA CATTTAGAAA GTGAGCTTGA AAAAATAGAT AAAAATAAAA GAGAAGATAA ACAAGAAAAT AAAGACAATA AAAATCTAAT TAGTCAAAAA CGAATCAATG ATGACGCACA GTTAAAATCA GCTATTGATA CTATTAAAAT TTTAAATATC AAACAAGGAC AATAA
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Protein sequence | MMELILKTKR FFAGLAGFAT TFILCLFLIS HLEAKVDRKE DQVQKRLEAL DKLTKTLTIV EQYYVDDQNI RDLVDKSLSG LLSNLDAHSS FLNEKDFNDM KIQTNGEFGG LGITVSMKDG ALTVVSPIEG TPADKAGIKS GDIILKINDE ATLGINLNDA VDKMRGKPKT QITLTIFRKG ATKPFDVTLT REIIKIESVY AKMIENENIL YLRVTNFDKS VVDVASKELK KYPNVKGVIL DLRNNPGGLL NQAIGLVNLF VDKGVIVSQK GRIASENQEY KADPKNKISN TSLVVLVNGG SASASEIVSG ALQDLKRGVI VGENTFGKGS IQQIIPINKT EALRLTIARY YLPSGRTIQA VGVKPDIEVF PGKVNTQEDG FSIKESDLKQ HLESELEKID KNKREDKQEN KDNKNLISQK RINDDAQLKS AIDTIKILNI KQGQ
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