Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1399 |
Symbol | icd |
ID | 5388967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1239663 |
End bp | 1241966 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640862367 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_001398441 |
Protein GI | 153951562 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAACTA AAACAAACTT TAAACTTACT CTTGCATTTT TTTTTATTTG TAATATACTT AAAAATGAAA ATAAAAATAA GTATTTTAAA GGACTAAAAA TGCAAATTAC TTATACCTTG ACAGATGAGT CACCAGCACT TGCTACTTAT TCGTTTTTGC CTATAGTGAA AGCTTTTTTA AGTAGGGCAC ATATAGGAGT AAAAACCTCA GATATTTCTT TATCCGGGAG AATTTTAGCT ACTTTTAGTG AGTATTTAAA AGAGGAACAA AGATGCGAAG ATGCTTTAGA GCTTTTAGGT GAGCTTGTAA AAAGATCGGA TGCAAATCTT ATTAAAACCC CAAATATTTC GGCTTCTATT CCTCAGCTTA AGGCAGCCAT TAAAGAATTG CAAGATAAAG GTTATATGTT ACCAAACTAC CCAGATGAGC CAAAAAATGA TGAAGAATTG CAAATTAAAA CAAAATATCA AAAAGTTTTA GGTTCAGCGG TTAATCCTGT ATTAAGACAA GGAAATTCAG ATCGTCGTTC AACAAAAGCG GTAAAAGACT ATGCAAAAAA CAATCCCTAT CGTGTGGTTG AGTTTAATCC AAACTCAAAA ACTCGTGTTT CTTACATGAA AGAAGGAGAT TTTTTCTCTA ACGAAAAAGC GGTTTTAATC GATCAAAATT GTGTGGCTAA TATAGAATTT ACAAGTATTG ATGGTAAAAA TGAAATTTTA AAAGAGGGTT TAAAACTTGA AAAAAATGAA ATTTTAGACG CTACTTTTAT GGATGTAGAG AAGCTTCAGG AATTTTATGC AAAAGAAATT AAAGCAAGTA AAGATGATGA TGTGCTTTTT TCTTTGCATT TAAAAGCTAC AATGATGAAA GTAAGCGATC CTATACTTTT TGGTTATGCG GTAAAAGTAT TTTTTAAGGA ATTATTTATC GAATTTCAAG ATGAATTTGA AAAATTAGGT ATTAATCCAA ATAATGGTTT AAGCGAGCTT TTAAGTAAAA TCGAAAATTC AAGTAAAAAA GATGAAATTC TAAAAAAATA CAATGAAATT TTAGCTAAAT CTACAGATAT TTCTATGGTA AATTCAGATA AAGGTATTAC AAATCTCCAT GTTCCAAGTG ATGTTATTGT TGATGCTTCT ATGCCTGCAA TGCTTAAAAA TGGCGCAAGA TTGTGGGATA AGAAAGGTAG GGAAAAAGAT ACAAATGCCG TAATTCCTGA TCAAACTTAC GCAACTATTT ATGAGGCGGT TATTGAAGAT TTGCATAAAA ATGGCACTTT AAATCCTTCA AAACTTGGCA GTGTATCTAA TGTAGGTTTA ATGGCTAAAA AAGCTCAAGA ATATGGCTCG CACGATAAAA CCTTTGTGGC TAAAGAAGAG GGAACTTTTA AAATAGTTTC TAATGGTAAA GTTTTATTAG AACATAAGGT TAGAAAAGGT GATATTTATA GAGCCAATCA GGCTAAATTT GATGCCGTGC TAAATTGGAT TGATTTAGGC GTAGAAAGAT CAGAACTTAG CGGAGCTGAA GCTATTTTTT GGTTGGATAG CAAAAGAGCT AGTAATAAAA TCATGATAAC TTTGGTGCAA AATCGTTTAA AAGAAAAGGG TAAAAATATA GCCATTTTAG CTCCAAAAGA AGCTTGCTTA AGAAGCTTGG AGTTAATCCG AGAGGGCAAG GATGTTATTT CTATCACGGG CAATGTTTTA AGGGATTATT TAACCGATCT TTTTCCTATT TTAGAACTTG GAACAAGTGC AAAAATGCTT TCTGTTGTGC CTATGTTAAA TGGTGGTGCT ATGTTTGAAA CAGGAGCAGG GGGTTCAGCA CCTAAACAAG TAGAACAATT AGTCGAAGAA AATCATCTGC GTTGGGATAG TTTGGGTGAA TTTTTGGCTT TGCAAGCAAG TTTGGAATTT TATGCAAATA AGTGTAGCAA TCATAAAGCT AAGGTTTTAG CAGAATGTCT TGATGAAGCT ATAGGTGAAT GGCTTGAAAA TAATAAAGCT CCATCAAGAA AAGTTAAAGA AGATGACAAT AGGACAAGTC ATTTTTACTT AGCAATGTAT TTTGCAAATC ATTTAGCAAG GCAGGCAAGT GATATGGAGT TTCAAAGCTT TTTTAAAGAT ATTGCCCTAG AACTTTCTTC TAATGAAGAA AAAATCAGAG CCGAATTTAA TGATGCGCAA GGTGTGAAAG TGGATTTGGG TGGGTATTAT AAATTTGATG ATGAAAAAGC AAATCAAATC ATGCGTCCAA GTGTAACTTT TAATGCTATT TTAGAAAAAA TAGGACAAAA ATGA
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Protein sequence | MKTKTNFKLT LAFFFICNIL KNENKNKYFK GLKMQITYTL TDESPALATY SFLPIVKAFL SRAHIGVKTS DISLSGRILA TFSEYLKEEQ RCEDALELLG ELVKRSDANL IKTPNISASI PQLKAAIKEL QDKGYMLPNY PDEPKNDEEL QIKTKYQKVL GSAVNPVLRQ GNSDRRSTKA VKDYAKNNPY RVVEFNPNSK TRVSYMKEGD FFSNEKAVLI DQNCVANIEF TSIDGKNEIL KEGLKLEKNE ILDATFMDVE KLQEFYAKEI KASKDDDVLF SLHLKATMMK VSDPILFGYA VKVFFKELFI EFQDEFEKLG INPNNGLSEL LSKIENSSKK DEILKKYNEI LAKSTDISMV NSDKGITNLH VPSDVIVDAS MPAMLKNGAR LWDKKGREKD TNAVIPDQTY ATIYEAVIED LHKNGTLNPS KLGSVSNVGL MAKKAQEYGS HDKTFVAKEE GTFKIVSNGK VLLEHKVRKG DIYRANQAKF DAVLNWIDLG VERSELSGAE AIFWLDSKRA SNKIMITLVQ NRLKEKGKNI AILAPKEACL RSLELIREGK DVISITGNVL RDYLTDLFPI LELGTSAKML SVVPMLNGGA MFETGAGGSA PKQVEQLVEE NHLRWDSLGE FLALQASLEF YANKCSNHKA KVLAECLDEA IGEWLENNKA PSRKVKEDDN RTSHFYLAMY FANHLARQAS DMEFQSFFKD IALELSSNEE KIRAEFNDAQ GVKVDLGGYY KFDDEKANQI MRPSVTFNAI LEKIGQK
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