| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1370 |
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| Symbol | |
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| ID | 5389095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 1211544 |
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| End bp | 1214411 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640862338 |
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| Product | autotransporter beta-domain-containing protein |
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| Protein accession | YP_001398412 |
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| Protein GI | 153952551 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.498654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTATTA CAAAAAATGG AACCTTAATG AACAGTGGTA GCACTGTAAA TCCTAGCTCT
GCAATTGTTT TAAAACCATC AAATAGCAGT ACTCCTACTC TTACACTCAT CAATGAAGGA
ACCATTAACA GCAGGATAGA TATAGAAAAT AACAATGGCT TTAGCGGAAC CATCACTGTC
AAGAAATTTG AAAATAAAGG AACCATCAAT GAACGAGTCT TTATGGGAGG GGACGGTAGT
GGAACTATCA GCATAGAGAA TTTTAACAAT GAAGGATTCA TCAAAGGTTA TGAGAGTGGT
ACTGATTCTT ATCAGGGAGT TAGGTTTGAA GGAAATGTCC ATGTAGGAAC CTTTGAAAAT
AAAAATAAAG GAACCATAGA AGGTAAGAAT GGTAATTATG CAATTCTTTT AATAGGAACA
AATAGTAGTA CTCCTACTCT TGAAAACTTT AACAATGAAG GATTCATTAA GGGCGAGATA
GGGATTGGGG GTACGCAAGG CTTTAGAGGA ACCGTCACTG TCAAGACCTT TGAAAATAAG
AATGGGGGAA CCATCGATGG AGGGATCTAT ATACCAGCGA GTACAGGAAC TATCAGCATA
GAGAATTTTA ACAATACAGG AACCATCAAG GGAGGGAATT ATCAGGGAGT TTATTTTCAA
GGCGATAAGG TCCATATAAA AACCTTTGAA AATAAAGGAT TCATCTCAGG AAGTGCTTAT
GATATGATAT ATAAGAATTT TAACGTATCG GGTGGTGTAA GCATGGCTGG TGGCACTATA
GACACTTTCA TCAATAAAGG AACCATACAA AGCACAGGAA CAAATCATAA TCCAGCAGGT
GTAAAATTAA ATTACGCTAC AGTAAAGACC TTTGAAAACA CAGGTTTTAT TTCGGGTACT
ATTGGTGTAT TAGCCACTCA GGGCACTATA GAAACTTTTA AAAACAGCGG AACCATAGAA
GCAACAGGCA AGGATGGTCA TGAAGCAGCT ATTCAAATTC GATCTGCTTT TAAAAACTCT
TCTTCCATCA CTCACTTTAC GAATGAAGGA ATTATTAAAT CAAAATCTCA TGGTGTATTG
ATAGAATCGG GCGATAAAAT AGAAACTCTT ACGAATAAAG GAACCATAGA AACAGAGTTA
AATGGCATAG GTTTTTATAA CTATACAGGC TCTGAGGAAA CCCACTTAGG TAAAATCATC
CTTGAATCAG ACAGTAGCAT TAAGGCTGGA AAGAACGGTA TTGACATAGA CAATCAAACT
ACTGCTAGGA GTATTAGAGT GGGTGGCATT GAAGTTCAAA AAGGTGCCAG TGTAAGTGGG
GATGAAGCGG GAATTTATTT AGGAAAGGAT AAAGAAATCA CTGCCCCCAT CACCATCTCA
GGAACAGTTA GTGGGGGGAA TGCAGGTATA GTCAATGAAG GTAGAATGGC TAGGGGTATT
ACTCATAATG GCGAAGCTGA GTTGGTTATC TCAAATCAGG GTTTAGTAGG TAAAGATGAT
AAGGGTAATA CAGTAACCAA TAATAAGGGC AGTGTTACAA TCAAAGATTG GGTTGTTACT
ACTAATGAAG AAGGCAAATT AGACACTGTG GTTATAGGTG GAGAGAAGAC AGAGAATGTA
CAAGTAAGCA ACATCACTGT AGATCAAAGT GGTTTGGAAC TTGAAGAATT AAACGAGATA
AAAAACCTCA TCTCAGGTGT GAGCACAAAC AATATTGCCA ATGTAAAAAC CAATGGGGGT
GGAGAAATAT CTTTAAGCTA TGATCCAATA TCAGCAAGGC TTTCTACAGA TGTTCAACTC
AATGCTTCCA TAGCAGGAGC AAACTTTAGA TCTTCAGTTG CCACGGCTTC AAAAAGAGCC
ACCTTTATAG ATAATGTTAT GGCTAATGCT ATGCAAAGCT TTAGCTTAGA TTCTTCAGGC
AAATCTCAAA AAATAGCCCT GTCTGAAAAG GGTAATTTAT ATGCCGATGC CAGTGATTAT
ATCAAGAATG ATTATATCAA GAATGATTAT ATCAAAAGTG ATTTGACTCA AGCAAATTAT
GGTTTGAATA AAGAGCATGC TTTATTCATC CTTCCTTATC TTTCTTCACA GAGTGTTGAA
CTTTCTTTAA ATGAAGAAAG TAAAGGACAC ACTAAAGGAA CCATCATAGG TTATTCTACT
TTAAAAGACA GTGGAATATA CGGTGTGTAT GCAGGTTATG AAGATACAAA GATGGATTCA
ACTTATTTTG ATGTGAATAA TATAAGCTAT TATACAGGTT TAAAATACTT TAATACCTTA
TTCACTACAG CTAAGGGTCA AGAAGTTTAT ATCAAAGCCC AGGCTCAAGC TGCCCTAATT
AAAAATGATT TCACTAAAAG AATAGGAAAG AATGAAGCTA AAGCTAAAGC TCATTCTTAT
ACTTATGGAA TCCATACCGC TTTGGGTATG AATTTCATTG CGGATAAAAA CATATTCTCA
CCTGAAGCCG GTTTTGCTTA TGAAGGAAGT TATACGGAAG CTTTTTCCAT GCAAGATACT
AGAGGTCAAG CCACTGTTAG GGGTGGAGAA AGAACCTATG CAAACCACTT GAATCTTTTC
TCTACTAAAA CAAGCTTTAC TTGGTTTAGA GATTGGTTGC CTAATCTAAA AACTTCAGTA
GAACTTGGAG CTAAGTTTAA TGTCAATCCT AAAGTAAAAG CTAGGGCTAG ATTTGGAAAT
ATGAAAGTGA ATGATGAGTT TCATTTACCC CGAGTACGCA AATTCGCAAG CACTTCTTTA
ATTGTTCCTG TTAATGAAGC TTTCTATTTT AGTTTAAACT ATAATGGAAT GTTTGATGAA
AAAGGCAATA CCCATACAGG ATTTGCTCAG TTTAATTATC TTTGGTGA
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| Protein sequence | MTITKNGTLM NSGSTVNPSS AIVLKPSNSS TPTLTLINEG TINSRIDIEN NNGFSGTITV
KKFENKGTIN ERVFMGGDGS GTISIENFNN EGFIKGYESG TDSYQGVRFE GNVHVGTFEN
KNKGTIEGKN GNYAILLIGT NSSTPTLENF NNEGFIKGEI GIGGTQGFRG TVTVKTFENK
NGGTIDGGIY IPASTGTISI ENFNNTGTIK GGNYQGVYFQ GDKVHIKTFE NKGFISGSAY
DMIYKNFNVS GGVSMAGGTI DTFINKGTIQ STGTNHNPAG VKLNYATVKT FENTGFISGT
IGVLATQGTI ETFKNSGTIE ATGKDGHEAA IQIRSAFKNS SSITHFTNEG IIKSKSHGVL
IESGDKIETL TNKGTIETEL NGIGFYNYTG SEETHLGKII LESDSSIKAG KNGIDIDNQT
TARSIRVGGI EVQKGASVSG DEAGIYLGKD KEITAPITIS GTVSGGNAGI VNEGRMARGI
THNGEAELVI SNQGLVGKDD KGNTVTNNKG SVTIKDWVVT TNEEGKLDTV VIGGEKTENV
QVSNITVDQS GLELEELNEI KNLISGVSTN NIANVKTNGG GEISLSYDPI SARLSTDVQL
NASIAGANFR SSVATASKRA TFIDNVMANA MQSFSLDSSG KSQKIALSEK GNLYADASDY
IKNDYIKNDY IKSDLTQANY GLNKEHALFI LPYLSSQSVE LSLNEESKGH TKGTIIGYST
LKDSGIYGVY AGYEDTKMDS TYFDVNNISY YTGLKYFNTL FTTAKGQEVY IKAQAQAALI
KNDFTKRIGK NEAKAKAHSY TYGIHTALGM NFIADKNIFS PEAGFAYEGS YTEAFSMQDT
RGQATVRGGE RTYANHLNLF STKTSFTWFR DWLPNLKTSV ELGAKFNVNP KVKARARFGN
MKVNDEFHLP RVRKFASTSL IVPVNEAFYF SLNYNGMFDE KGNTHTGFAQ FNYLW
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