Gene JJD26997_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1321 
SymbolispG 
ID5390300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand- 
Start bp1169295 
End bp1170368 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content35% 
IMG OID640862294 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_001398368 
Protein GI153951482 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTATA AAAGATTTAA AACCAGACAA ATCAAAGTAG GAAATGTTTT AATAGGCGGT 
GATGCACCCA TTTCAGTTCA ATCTATGCTT TTTACTAAAA CAAGAGACAT AGAAGGTTCT 
TTAGAGCAAA TCAATCGTCT TTATTTTGCA GGAGCAAATA TAGTGCGTTT GGCGTGCTTG 
GATATGGCTG ATGCAAGGGC TTTGAAAGAG ATTAAAGCTA AAAGTCCTTT GCCTTTAATC 
GTAGATATTC ATTTTAATCA TAATTTGGCT GTATATTGTG CTGAATTTAT CGATGGAGTG 
CGTATAAATC CTGGCAATAT AGGCTCCAAA GAAAATATCA AAGAAGTGAT AAAAGCATGT 
AAAGAGTGCA ATATCCCTAT ACGCATCGGT GTAAATCACG GCTCCATAGA AAAACAATTT 
AGTGATAAAT TTGGCTATGG TGTCGATGCT ATGCTAGAAA GTGCGATGTA TAATATCAAG 
CTTTTAGAGG ATTTAGACTT TTTTGATATT AAAATTTCCA TGAAGACTTC AGATGCTCAA 
AAAACTATAG AAGCTTATGA GAGATTAAGA CCGCTTTGTG ATTATCCTTT TCACTTAGGG 
GTAACTGAAG CAGGAACCAA ATTTCATAGC ACTGTAAAAA GTTCTATAGC TTTAGGAAAT 
TTACTTCTTA AAGGTATAGG TGATACCATG CGTGTTTCTA TGACAGGCGA GCTTGAAGAA 
GAAATTCGTG TAGCAAGGGC GATTTTGCAA GATAGCGGAG TGCAAAAAAG CGGAGTAAAT 
ATCATCTCTT GTCCAACTTG CGGTAGGATT CAAAGTGATT TGTTAAGCGC GATTAAAATT 
GTAGAAGAAA AAACCAAGCA TATAAAAGAA CCTTTAAATA TCAGTGTCAT GGGTTGTGTG 
GTAAATGCTT TAGGCGAAGC TAAAGGTGCT GATGTGGCTA TAGCCTTTGG GAAAAATCAA 
GGACTTGTTA TAAGACATGG TGAAGTTGTA GCTAAATTAA AAGAAAGTGA ACTTGTAGAT 
AGATTTTTAG CTGAAGTTGA AGATGAGGTT AAAAGTAGGG TTGTAAAAGA ATAA
 
Protein sequence
MEYKRFKTRQ IKVGNVLIGG DAPISVQSML FTKTRDIEGS LEQINRLYFA GANIVRLACL 
DMADARALKE IKAKSPLPLI VDIHFNHNLA VYCAEFIDGV RINPGNIGSK ENIKEVIKAC 
KECNIPIRIG VNHGSIEKQF SDKFGYGVDA MLESAMYNIK LLEDLDFFDI KISMKTSDAQ 
KTIEAYERLR PLCDYPFHLG VTEAGTKFHS TVKSSIALGN LLLKGIGDTM RVSMTGELEE 
EIRVARAILQ DSGVQKSGVN IISCPTCGRI QSDLLSAIKI VEEKTKHIKE PLNISVMGCV 
VNALGEAKGA DVAIAFGKNQ GLVIRHGEVV AKLKESELVD RFLAEVEDEV KSRVVKE