| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1309 |
|---|
| Symbol | |
|---|
| ID | 5390160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 1154426 |
|---|
| End bp | 1155238 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640862284 |
|---|
| Product | flagellar basal-body rod protein |
|---|
| Protein accession | YP_001398358 |
|---|
| Protein GI | 153952418 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4786] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000564283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATG GATATTATCA AGCAACTGGT GGAATGGTAA CTCAGTTTAA TAAGCTTGAT
GTGATTACTA ATAATCTTGC CAATATTAAT ACAAGTGGAT ACAAAAGAGA TGATGTGGTT
ATTGCAGATT TTAAAAGGAT TTTTAAAGAA ACTCAGGATG AGTTGCCTAT AGAAAATCGC
ACAAGAGATG CATCTCGTTT TGTAAATACT ACAATAGATG GAATCCCGCA AGTTTCTCAA
GAATATACGG ATTTCAGCCT AGGTTCTTTA AAGGCCACAA ACAATCCTTT GGATTTGGCA
ATGACTAGAG AAGATACTTT TTATTTGGTT CAGACCAAAG ATGGAGAAGT AAGATTAACT
AAAGATGGAA ATTTTCAACT TGATGATGAG GGTTATTTGG TAAATAAGCA AGGATACAAG
GTATTAAGTA GTGATTATTT TAATAATCCT CAGAATGCTG GCATACGCAT TCCTAATGGT
GCTGTTCAAA TTAGCGTTGA TAAAAACGGA AGCATTGAAG TTGATGGAGC TCAAAATGCA
AGATTATTTG TAGCACAAGT AGATGATATA AGAGCTTTGC AAAAAGATGG GGATAATGTC
TATAAAATAG ATGATCTAAC CCGTATTAGA TATTTGGAAA ACTCCAATGC CATTCGCCAA
GGTTTTTCTC AGGGATCAAA TGTTAATCCA GTTACTGAAA TGGTAGGACT GATTGAAGCA
AACAGAATGG TAGAAATGTA TCAAAAAGTT ATGACAGCTC ATATGGATGA CTTAAATCAA
GAAGCTATCA ATAAGCTTGC AGCTGTTAAA TAA
|
|---|
| Protein sequence | MQNGYYQATG GMVTQFNKLD VITNNLANIN TSGYKRDDVV IADFKRIFKE TQDELPIENR
TRDASRFVNT TIDGIPQVSQ EYTDFSLGSL KATNNPLDLA MTREDTFYLV QTKDGEVRLT
KDGNFQLDDE GYLVNKQGYK VLSSDYFNNP QNAGIRIPNG AVQISVDKNG SIEVDGAQNA
RLFVAQVDDI RALQKDGDNV YKIDDLTRIR YLENSNAIRQ GFSQGSNVNP VTEMVGLIEA
NRMVEMYQKV MTAHMDDLNQ EAINKLAAVK
|
|---|
| |