Gene JJD26997_1294 details

Gene Information

• Locus tag: JJD26997_1294
• Symbol: rimM
• ID: 5389354
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: -
• Start bp: 1142259
• End bp: 1142798
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 640862269
• Product: 16S rRNA processing protein RimM
• Protein accession: YP_001398343
• Protein GI: 153951260
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTGAAA AAGATTTTGT TCAAGTTGCA AAACTTGGTA AAACTGTGGG TCTTAAGGGT 
TATGTAAAAT TGCATAACCT GAGCGACTTT TCTTCTCAAT TTAAAAAAGA TGCTACTTTT 
TTTATAAAAA ATACCAAAGA AATGTTAAAG ATTAAGCACT ATAATGCAAG CAATTCTACT 
GTTTTATTTG AAAATTATGA AGATATAGAA AAAGCTAAAG AACTAACTAA TCTTATTCTT 
TTTCAGAGTA TCGAGAAAAG CAGACAAACT TGTAAATTAA AAAAAGATGA GTTTTTTTAT 
TTTGATATTT TAGAATGTGA AGTTTTTGAA GAAGATAAAA GATTAGGTAA AGTGGTTGAT 
ATCTTGGAAA CTGGAGCTTC TTATTTATTT GAAATTCAAA GCGATGAAAA ATGGGTAGAA 
AAAAAATATC CTAAAATATT TTTTATTCCA TATTTAGATA AATTTGTTAA AAATATAGAT 
ATAGAAAAAC GACAAATTTT TTGCACACAA GATGCTTTTT TAATTTTAGA AAATTCATGA 

 

Protein sequence

MSEKDFVQVA KLGKTVGLKG YVKLHNLSDF SSQFKKDATF FIKNTKEMLK IKHYNASNST 
VLFENYEDIE KAKELTNLIL FQSIEKSRQT CKLKKDEFFY FDILECEVFE EDKRLGKVVD 
ILETGASYLF EIQSDEKWVE KKYPKIFFIP YLDKFVKNID IEKRQIFCTQ DAFLILENS