Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1290 |
Symbol | |
ID | 5390131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1139280 |
End bp | 1140620 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640862266 |
Product | 3-deoxy-7-phosphoheptulonate synthase |
Protein accession | YP_001398340 |
Protein GI | 153951365 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGACTA AGAATTCTTG GAAAAACTAT CCTATAAAAC AGCAACCTAT CTATCCAGAT CAAGAGGAAA TGAATAGAGT TTTAGCAAGA CTTGAGAAAC TTCCTCCTTT GGTTTTTGCT GGAGAAGTGA GAAATCTTCA AAAGTCTTTA GCAAGAGTTT GTAAAAAAGA AGCTTTTTTA CTTCAAGGTG GAGATTGTGC TGAAAGTTTT GAAAATTTTG GCGCTGTAAA TATCCGTGAT ATGTTTAAAA TTTTACTTCA AATGGCTATA ATACTTACAT TTGCTGGTGG ATGTCCTGTT GTAAAAATTG GTCGTATTGC AGGGCAGTTT GCCAAGCCAA GAAGTAGTGA TTTTGAAGAG TTAAATGGTA TAAGTCTTCC TAGTTATCGT GGTGATATTA TTAATGGTTT TGAATTTAGT GAACAAGCAC GCATTCCTGA TCCACATAGA ATGCTTGAAG CTTATTATCA AAGTGCAACA ACGCTAAATT TGTTGCGTGG ATTTGCTAAG GGTGGTTTAG CGGATTTACA TGAAGTGCAT CGTTGGAATT TGGGTTTTTT AAAAAAGAGT GAACTTCATA AACAATATAC TGATATCAGT GAAAAAATTT CACAAGCTTT AGCTTTTATG GAAGCTTGTG GGATTAATAC AAACAATACC CCAAGTCTAA GAGAAGTTAG TGTTTATACT TCACATGAAG CTTTGCTTTT GCCTTATGAA GAAGCTTTAA CTAGAGTGGA TAGTTTAAGT GGGGAAATTT ATGATTGTTC AGCTCACATG CTTTGGATAG GTGAAAGAAC AAGGGCACTT GATGAAGCTC ATGTACATTT TTTAAGCGGA GTAAAAAATC CTTTAGGGGT TAAAATAGGA TCTAGTGCAA GTGCTGATGA TGTTATAGCT TTAGCAAATG TTTTAAATCC AAATAATGAA GAAGGAAGAT TAAATATTAT TATCCGTATG GGTGCAGATA AAATTATCAA TAATTTGCCA AAAATTTTCT CTAAACTTAA AAGTGAAGGT TTAAATTTGG TATATAGCAT AGATCCTATG CATGGAAATA CAGTAAAAGC AGGTAATTTT AAAACACGTG AGTTTGATAA AATCATGCAA GAAGTGAGAT CTTTTTTTGA GATTGCAATA AGCGAAGGAG TTTATCCAGG TGGAGTGCAT CTTGAAATGA CTGGGAAAGA TGTAACAGAA TGCACAGGTG GTGCAAGCAA TGTTACTGCT CAAAGTTTAG AAGATCGTTA TGAGACTCAA TGCGATCCAA GACTTAATGC GGATCAAGCA TTAGAGCTTG CTTTTTTAAT TGCAGATTTA GTAAAAAAGG CTGGAAAATG A
|
Protein sequence | MWTKNSWKNY PIKQQPIYPD QEEMNRVLAR LEKLPPLVFA GEVRNLQKSL ARVCKKEAFL LQGGDCAESF ENFGAVNIRD MFKILLQMAI ILTFAGGCPV VKIGRIAGQF AKPRSSDFEE LNGISLPSYR GDIINGFEFS EQARIPDPHR MLEAYYQSAT TLNLLRGFAK GGLADLHEVH RWNLGFLKKS ELHKQYTDIS EKISQALAFM EACGINTNNT PSLREVSVYT SHEALLLPYE EALTRVDSLS GEIYDCSAHM LWIGERTRAL DEAHVHFLSG VKNPLGVKIG SSASADDVIA LANVLNPNNE EGRLNIIIRM GADKIINNLP KIFSKLKSEG LNLVYSIDPM HGNTVKAGNF KTREFDKIMQ EVRSFFEIAI SEGVYPGGVH LEMTGKDVTE CTGGASNVTA QSLEDRYETQ CDPRLNADQA LELAFLIADL VKKAGK
|
| |