Gene JJD26997_1271 details

Gene Information

• Locus tag: JJD26997_1271
• Symbol: edd
• ID: 5389907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: +
• Start bp: 1117937
• End bp: 1119739
• Gene Length: 1803 bp
• Protein Length: 600 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640862248
• Product: phosphogluconate dehydratase
• Protein accession: YP_001398325
• Protein GI: 153951295
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTACAAA ATAAACTAGA GCAAATTACA AAAAAAATTA TAGAACGCAG TAAAAAAACA 
AGGAATGCTT ATTTAGAGAG AATTTATACC TATAAAGGCA AAATTCAAAA AAAAGATTTA 
GGCTGTGCTA ATTTAGCCCA TGCTTATGCA AGTATTCCTA AACATATAAA AGAAAGAATT 
AAAGATAGCG AAACATTAAA CTATGCTATA ATTTCAGCTT ACAATGATAT GCTTTCGGCT 
CACCAGCCTT TTAAAAACTA CCCAGATATA ATCAAAAAAG AAATTTTTAA GTATAACGCT 
TTTGCACAAT TTGCAGGAGG CACACCCGCT ATGTGTGATG GTATCACTCA AGGCTATGAG 
GGTATGGAGC TTAGTCTTTT TTCAAGAGAT GTGATTGCTA TGAGTGTAGC CATAGCCCTT 
TCTCATAATG TTTTTGATGG GGCTTTTTAT CTGGGTGTGT GTGATAAAAT TGTTCCGGGT 
CTTTTAATAG GAGCCTTAAG TTTTGGGCAT TTGCCAAGTA TTTTTATACC TTCAGGACCT 
ATGACTAGTG GAATTTCTAA TGATGAAAAA TCTAAAACCA GACAACTTTT TGCTGAAGGT 
AAAATTTCTC GCGATAAATT ACTCGAAAGC GAAATGAAAT CTTACCACGA TATCGGCACT 
TGCACCTTTT ATGGCACAGC CAATTCAAAT CAAATGATGA TGGAATTTAT GGGTTTGCAT 
TTGCCAAATT CTGCTTTTAT CAATCCAAAT ACCACCCTAA GAGAAGCTTT GGTAAAAGAA 
GCGGCTTCAC ATATGGTAAA AAATAAAATT AAAGGCATAG GAGAACTTCT TAGTGAAAAA 
AATATTGTCA ATGCCATAAT AGGACTTATG GCAACGGGGG GTTCGACTAA TCATACTATT 
CACTTAAGTG CTATTGCTAG AGCAGCGGGC ATTATTATAA ATTGGGATGA TTTTGGTGCT 
ATTTCTAGCA TCACTCCACT TTTAGCAAGA GTTTATCCTA ATGGAAAAGC CGATGTAAAT 
CAATTTGAAG CTTCTGGAGG TATAGCTTTT ATTATTCATG AGCTTTTAAA AGAGGGGTTA 
TTACACGAAG ATGCAGATAC TATTATGGGT AAGGGTTTGG AAGCTTACAC CAAAAATCCA 
TTCTTAATTG ATGATAAAAT TATCTATAAA GATGGAGTAA AAACAAGCAA AAATGAAAAT 
ATATTAAGAA ATATAGAAAA TCCTTTTTCT AAAGATGGGG GAGTTAGAAT TTTAAGGGGA 
AACATAGGCA GAGCGGTAAT TAAAATTTCA GCCGTAAAAG AAGAACACCA AGTCATAAAA 
GCTCCAGCCT TAGTTTTTCA CTCTCAACAA GAATTTTTAC AAAGCTTTCA AAATGGGGAA 
TTAGAAAAAG ATTTTATCGC TGTTTTGCCC TATCAAGGAC CTAGAGCAAA TGGTATGCCA 
GAACTTCACA AACTTACCCC GCCTTTGGGA ATTTTACAAG ATAGAGGTTT TAAGGTTGCT 
CTTGTTACAG ATGGGAGAAT GTCAGGGGCC TCAGGCAAAG TTCCAGCGGC TATACATATG 
AGTCCAGAAG CCTTGCTTGG AGGTAATATA GCAAAAATCA AAAATGGGGA TTTGCTTTTG 
CTTGACGCAA AAAATGGCAC TCTTGAAATT TTAATCAGTG AAAAAGAATG GCAAGAAAGA 
ACAGCCAATA AATTTGAAAG TCAAGAATTT TTTGGCTGTG GCAGAGAGCT TTTTGCAGGG 
TTTAGAACGC AAAGTTCAAG CGCAGAAACG GGTGCTATGA GCTTTGGAGG ATATTTCAGT 
TAA 

 

Protein sequence

MVQNKLEQIT KKIIERSKKT RNAYLERIYT YKGKIQKKDL GCANLAHAYA SIPKHIKERI 
KDSETLNYAI ISAYNDMLSA HQPFKNYPDI IKKEIFKYNA FAQFAGGTPA MCDGITQGYE 
GMELSLFSRD VIAMSVAIAL SHNVFDGAFY LGVCDKIVPG LLIGALSFGH LPSIFIPSGP 
MTSGISNDEK SKTRQLFAEG KISRDKLLES EMKSYHDIGT CTFYGTANSN QMMMEFMGLH 
LPNSAFINPN TTLREALVKE AASHMVKNKI KGIGELLSEK NIVNAIIGLM ATGGSTNHTI 
HLSAIARAAG IIINWDDFGA ISSITPLLAR VYPNGKADVN QFEASGGIAF IIHELLKEGL 
LHEDADTIMG KGLEAYTKNP FLIDDKIIYK DGVKTSKNEN ILRNIENPFS KDGGVRILRG 
NIGRAVIKIS AVKEEHQVIK APALVFHSQQ EFLQSFQNGE LEKDFIAVLP YQGPRANGMP 
ELHKLTPPLG ILQDRGFKVA LVTDGRMSGA SGKVPAAIHM SPEALLGGNI AKIKNGDLLL 
LDAKNGTLEI LISEKEWQER TANKFESQEF FGCGRELFAG FRTQSSSAET GAMSFGGYFS