Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1262 |
Symbol | |
ID | 5389720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | + |
Start bp | 1107040 |
End bp | 1107747 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640862237 |
Product | protein TonB |
Protein accession | YP_001398318 |
Protein GI | 153951554 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT TTATAAACAA TCATAAAAAC CAATCTTCCC TTATTACTTT ATTTGTTTTT ACACCTTTAT TTTTTGTTTT TCTTTATTCT AAAAATTTTT TACATATACA GCCTAATGAC GTTATTAAAG AAAATAAATT TAATATGGCA ATAAAACATT TTGTACAAAA TTCCTCCGAT ATAAAACCGA CACAGCCAAC ACAAACCATA CAAGAACCTT CCAATATACA ACCTAAAGAA CCTGTGCAAG AAATAATCAA AAAACCAAAA CCAAGAAAAG AAAAACCTAT CATTAAACCT AAAAAAATAA TCCCTCCAAC AAACGCAAAG GCAATAAGTC AATCCAAAAA AGATACAAGC TCACAACAAC CAATCGCGCA GCAACAAACC CCACAAACCA ACTCTTACCA AAGTGTATCT TTAACTAGCA ATAGTGAGCT TTTAAAAGAA ATAAAATCAG CAATCGATGA AGCCCTAATC TACCCTAGAC AAGCTAGAAA AATGCGTATG AGCGGGGAAG TTCTTGTAGA ATTTACTTGG ACAAAAAACA AAAAATTAGA AAATTTAAAA ATACTCAAAC CTTCAAAATA TGATTTCTTA AACAAAAGTG CTTTAGAAAC TATACATATA GCTTCTAAAA AATTTCCACA ATACGAAAAA ACTTTCCATA TAAAAATACC TTTGATATAC AAACTAAACT ATAAGTAA
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Protein sequence | MKTFINNHKN QSSLITLFVF TPLFFVFLYS KNFLHIQPND VIKENKFNMA IKHFVQNSSD IKPTQPTQTI QEPSNIQPKE PVQEIIKKPK PRKEKPIIKP KKIIPPTNAK AISQSKKDTS SQQPIAQQQT PQTNSYQSVS LTSNSELLKE IKSAIDEALI YPRQARKMRM SGEVLVEFTW TKNKKLENLK ILKPSKYDFL NKSALETIHI ASKKFPQYEK TFHIKIPLIY KLNYK
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