Gene JJD26997_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1262 
Symbol 
ID5389720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp1107040 
End bp1107747 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content29% 
IMG OID640862237 
Productprotein TonB 
Protein accessionYP_001398318 
Protein GI153951554 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT TTATAAACAA TCATAAAAAC CAATCTTCCC TTATTACTTT ATTTGTTTTT 
ACACCTTTAT TTTTTGTTTT TCTTTATTCT AAAAATTTTT TACATATACA GCCTAATGAC
GTTATTAAAG AAAATAAATT TAATATGGCA ATAAAACATT TTGTACAAAA TTCCTCCGAT
ATAAAACCGA CACAGCCAAC ACAAACCATA CAAGAACCTT CCAATATACA ACCTAAAGAA
CCTGTGCAAG AAATAATCAA AAAACCAAAA CCAAGAAAAG AAAAACCTAT CATTAAACCT
AAAAAAATAA TCCCTCCAAC AAACGCAAAG GCAATAAGTC AATCCAAAAA AGATACAAGC
TCACAACAAC CAATCGCGCA GCAACAAACC CCACAAACCA ACTCTTACCA AAGTGTATCT
TTAACTAGCA ATAGTGAGCT TTTAAAAGAA ATAAAATCAG CAATCGATGA AGCCCTAATC
TACCCTAGAC AAGCTAGAAA AATGCGTATG AGCGGGGAAG TTCTTGTAGA ATTTACTTGG
ACAAAAAACA AAAAATTAGA AAATTTAAAA ATACTCAAAC CTTCAAAATA TGATTTCTTA
AACAAAAGTG CTTTAGAAAC TATACATATA GCTTCTAAAA AATTTCCACA ATACGAAAAA
ACTTTCCATA TAAAAATACC TTTGATATAC AAACTAAACT ATAAGTAA
 
Protein sequence
MKTFINNHKN QSSLITLFVF TPLFFVFLYS KNFLHIQPND VIKENKFNMA IKHFVQNSSD 
IKPTQPTQTI QEPSNIQPKE PVQEIIKKPK PRKEKPIIKP KKIIPPTNAK AISQSKKDTS
SQQPIAQQQT PQTNSYQSVS LTSNSELLKE IKSAIDEALI YPRQARKMRM SGEVLVEFTW
TKNKKLENLK ILKPSKYDFL NKSALETIHI ASKKFPQYEK TFHIKIPLIY KLNYK