Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1261 |
Symbol | cfrA |
ID | 5389486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1104614 |
End bp | 1106722 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640862236 |
Product | ferric receptor CfrA |
Protein accession | YP_001398317 |
Protein GI | 153950984 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TATGTTTATC ATTATTTACA TCGGTTTTTT TAATTTCTGA TGCCATATCG CAAAATGTAG AATTAGATAG TTCGATCGTT AGTGCTTCTG GATTTTCTCA GGATATTAAA GAAGCACCTG CTACTATCAA TGTCATTAGT AAAAAAGAAC TGCAAAGCAA ACCTTACAGA GATGTTGCAG AGGCTATTGC GGATATCCCA GGTGTTGATT TATATGCTAG CAAGGGAAAA ACAGGTTCTT ATAATATTAC TATGAGAGGT ATTACTGGAT ATACTTTGGT TTTGATTGAT GGGCGGCGTC AAGGAATCGG TGGAGAGGTT GGCCCCAATG GTTTTAATGA AATTTCAAAT TCTTTCTTAC CGCCGATTTC TAGCATAGAA AGAATAGAAG TTATAAAAGG TCCTATGAGT ACTTTATACG GATCCGAAGC TTTAGGCGGG GTGGTAAATA TCATTACTAA AAAAGTGAGT GATAAATGGG AAACTTCTGT AAGTTTGGAT GCTCTTTTAA ATGAAAATAA AGACTGGGGC AATACTTATG GAACAAGTAT TTATTCTAGT GGTCCTTTAA TGAATGATAA ATTAGGTCTA ACACTTCGAT TTAGAGAATT TTACAGACAG CAATCCAATG TTGAATTTAC ACATGGAAGT GGACAAAGAG TTCCAGGAGA TCAAGCTCAA AGTCCTACAA AGGCAAATAA TTTTAACATA GGAACAAGAG TCAGTTATTT GGCTAATGAT TATAATACTT TTATATTTGA TATAGATTTT TCAAGAAATC ATTATGATAA TAAACAAGCT CAATTAGGAA CTATTACAAA ACCAGCTGAT AAAAATAAGG GTTCTTTAAC AGGTGGTTAT ACTGATATAA TGGAAGTTGA TAAATTGGTC ACTTATTTGA GCCATGAAGG TATTTATGAA AACTTTTCCA TTACTTCTAC TTTGCAGTAT AATAGGGTAA GCAATAACGG ACGTGAAGTT GTAGGACAAG CTAAACAGCC ATTTTTGGGA GAAAATAGGG ATATAGTTGC AGAAGATATT ATCTTAGATA CTAAGTCTGT TATTCCTCTA GGACAAAATC ATATTTTGAG TGCAGGCGGT GAATATAGGC TTGAAAAAAT GCAAGATAAA ATAGCTAATC CTACTAATTT TGATCAGTAT TTATTGGCAA TATTTGCAGA GGATGAATAT AGTATAAAAG ATGATTTAAG ACTGACTTTT GGAGCAAGAT ATAACCATCA TGAAATTTTT GGAAATAATA TTTCACCAAG AGCTTATTTG GTTTATAATC CTACCGATGA ACTTACTTTC AAAGGTGGTA TATCTACAGG CTTTAGAACT CCTTATGCAA ATCGTTTGAT AAATGGAACT TATAATTATA GTGGTCAAGG TAAATTTCCT ATATATGGAA ATCCTGATTT AAAAGAAGAG ACATCTTTGA ATTATGAAAT AGCAGCTATT TATAATAATG ATTTATTTTA TGTTTCAGCA ACAGGTTTTT TAACAAATTT TAAAGATAAA ATTTCAACCC AAAAATATGA CAAAAATAGT ATGATTCCAG GCATTAGTAA ATGTGAAGCC AATGCATGTT ATAGGGCGAT TAATCACGGT AAGGTTGAAT ACAAAGGTGT AGAGCTTGGG GCAGGGATAA GCCCTCTTGA TAATTTAAAT GTAAATCTTG CTTATACTTA TCTTGATACT GAGGTTAAAG AAGCACAAGA TAGAAGTGTG ATAGGCAAAC CTGAACGAAA CAGTTTAAAA CATAATATTA TGTTAAAAAC TGAATACAGC TTTTACAATA AATTCACCCC TTGGATAAAA GGCGAATGGC AAATAGATCG CTATATGGGT GATACGAACA TCAATAGAGA GTATTACAAG GATATCTTTT TAGCTTCTAT GGGTGTGCGT TATGATATCA ACAAACAATG GAGTATCAAT GCAGCTATTT ATAATCTTTT TGACAAAAGC TTTACAAATA GTTGGGAATC TTATAAAATT ACTAATAAAA CTAAAACTAT TGAAACTGCT TGGGTAAATA CCTACAATCG TATAGAAGAA GGAAGAAGAA TGTATATTTC TATCAATGGT AGCTTTTAA
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Protein sequence | MNKLCLSLFT SVFLISDAIS QNVELDSSIV SASGFSQDIK EAPATINVIS KKELQSKPYR DVAEAIADIP GVDLYASKGK TGSYNITMRG ITGYTLVLID GRRQGIGGEV GPNGFNEISN SFLPPISSIE RIEVIKGPMS TLYGSEALGG VVNIITKKVS DKWETSVSLD ALLNENKDWG NTYGTSIYSS GPLMNDKLGL TLRFREFYRQ QSNVEFTHGS GQRVPGDQAQ SPTKANNFNI GTRVSYLAND YNTFIFDIDF SRNHYDNKQA QLGTITKPAD KNKGSLTGGY TDIMEVDKLV TYLSHEGIYE NFSITSTLQY NRVSNNGREV VGQAKQPFLG ENRDIVAEDI ILDTKSVIPL GQNHILSAGG EYRLEKMQDK IANPTNFDQY LLAIFAEDEY SIKDDLRLTF GARYNHHEIF GNNISPRAYL VYNPTDELTF KGGISTGFRT PYANRLINGT YNYSGQGKFP IYGNPDLKEE TSLNYEIAAI YNNDLFYVSA TGFLTNFKDK ISTQKYDKNS MIPGISKCEA NACYRAINHG KVEYKGVELG AGISPLDNLN VNLAYTYLDT EVKEAQDRSV IGKPERNSLK HNIMLKTEYS FYNKFTPWIK GEWQIDRYMG DTNINREYYK DIFLASMGVR YDINKQWSIN AAIYNLFDKS FTNSWESYKI TNKTKTIETA WVNTYNRIEE GRRMYISING SF
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