Gene JJD26997_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1244 
Symbol 
ID5389115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand+ 
Start bp1090057 
End bp1090620 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content31% 
IMG OID640862223 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_001398304 
Protein GI153952584 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0311504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTT TATTAGGAAT TTCTGGTTCA AGCAGTGTCA ATTTAGGCTT AAAATTATTA 
AAAAATTTAG AAAATCAATG CGAACTTTAT TGTATTTTAA CTCAAGGCTC AAAACTTAGT 
TTCAAAGCCG AAAATCAGGC AGATTTAGAA GAAATTTGTC GAGAAAATTT TAAACACACT 
TATTTTTTAG ATGATAAAAA TTTAAGTCTA AGCGTAGCAA GTGGATCTTT TGGAATAGAA 
AAAACCATCA TTGCCCCTTG TTCGATTTCA AGTTTGGCAA AAATTCGTGC TGGTTTTGCA 
GACACTCTTT TAATGCGTGC TGTAGCAGTA GCCTTAAAAG AAAGAAAAAA ACTCATCTTA 
GGCATACGCG AAATGCCTTT TTCTACTTTA AATTTAGAAC ATATGTTAAA ACTTAGCCAA 
ATGGGAGTTA TTATCGCACC TCCTATTATC GCAAGCTATT CTAAAGCAAA CAATCTAGAA 
CAAATGGAAA ATTTTATCGT AGGCAAATGG CTAGATCTTT TAGAAATAAA ACACGATTTA 
TATGAAAAAT GGCAAAATTT TTAG
 
Protein sequence
MKVLLGISGS SSVNLGLKLL KNLENQCELY CILTQGSKLS FKAENQADLE EICRENFKHT 
YFLDDKNLSL SVASGSFGIE KTIIAPCSIS SLAKIRAGFA DTLLMRAVAV ALKERKKLIL 
GIREMPFSTL NLEHMLKLSQ MGVIIAPPII ASYSKANNLE QMENFIVGKW LDLLEIKHDL 
YEKWQNF