| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1207 |
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| Symbol | |
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| ID | 5389457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 1057142 |
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| End bp | 1058884 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640862195 |
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| Product | putative ABC transporter, ATP-binding protein/permease MsbA |
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| Protein accession | YP_001398276 |
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| Protein GI | 153952330 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.272032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAATG AGATGAATTT AAAAGAGGTT TTAATACGCT TTAAGCCCTT TTATAAAAGA
TATTGGAAAC AATTTGCTAT AGCTATTTTT GGTATGATTT TAGCAAGCGG AGGAACTGCT
GGAAGTTTTT ATGCTTTAGA ACCTATTTTA AATTATATTT TCGTTGAAAA AAATGAAGCT
TTGCTTTATA CAGTGCCTTT TTTGCTAGTA TTGATGTATT TTTTTAAAAA TCTTGGAACT
TATTTGCAAA GTTTTTATGT TTCTTTTATA GGAACAGATA TGTTAAGAGT ATTGCGTGCT
AGGGTTTTAA AAAATATTTT ACGCTTGGAT ATGGATTTTT TTAAACGCTA TAGAAGCGGA
GAGCTTGTAA GTCGTTGTAC TAATGATATT AATGCGCTTC AAAGCATAGT ATCAAACATT
ATTCCTGATT TTTTTAGAGA GCTTTTAACC GCCATAGGAC TGCTTTTGGT AGTCTTGTAT
CAAAGTCCTA CTTTAGCTTT TTTTGCTTTA GTGATTTTGC CTTTGGCTAT TTTTCCTTTG
GTGTGGTTTG CTAAAAAACT TAAAAAATAC GCAAGAAATA TACAAGAGAC AAATTCGGAT
TTGCTTTCTT ATTTGGGTGA AATTTTTTCA AATATTGAAT TGATTAAAGC CAATGATAAT
GAAAAAAAAG AAAGTGATAA ATTTGCTAAG CATAATGATA CTTTATGTAA ATTAAACCTA
AAATCCGCAC GTATTGATGC ACTTACAAGT CCTTTAATGG ATATGATGGG CTCTGTTGGG
GTTGCTGTGG TGATTATTGT AGGGGGTAGA GAGATTATCA ATGGTTCTAT GAGTGTGGGA
AGTTTTATCA GCTTTGTTTC AGCGCTTTTT GCGATATATA CTCCTTTAAA ACGTCTTACT
TCTTTATATG GAAAACTTCA AGGCGCTGTT GCGGCAAGTG AAAGAACTTT TTATTTATTG
GATTTAGAAC CTCAAATTAA AGGCGGAAAT AAAGAATTGA AAAGCATTGA AAGAATTAGC
TTTGAAAATG TTGAATTTGC TTATGAAAAT CCACATAAAA GTGTCTTAAA AGGCGTAAAT
TTTGATTTCG TTAAAGGGCA AATGCTTGCT CTTGTAGGAA TAAGCGGGGG TGGTAAATCT
TCTATTATTA ATCTTTTGAT GTATTTTTAT GAAAAGCAAA AAGGTAAAAT TTTACTCAAT
CAAGAAGATA TTAGCACTTT TACCATAGAA AGTTTACATA CTAAAATAGG ACTTGTAACG
CAAAATATTT ATCTTTTTAA TGATAGTTTT GCTGCAAATA TTGCTTATAG TGAAGAGTTA
GAAGAAGAAA AAGTCGTCCA AGCTTTAAAA TTGGCCAATG CTTATGAATT TGTTAAAGAA
ATGGGCGGGA TTTGGGCTGA AGTGAAAGAA CATGGTAAGA ACTTAAGTGG AGGGCAAAAA
CAAAGAATAG CAATCGCTAG AGCTTTATAT AAAAATCCTG ATGTGCTTGT TTTTGATGAA
GCAACTTCAG CTTTGGATAA TGAAAGTGAA AAAGCAATAG TTAAAACTAT AGAAAATTTA
AAACAAGACA GATTGATTTT AGTGGTTGCA CATCGTTTAA GCACTATAGA AAATGCAGAT
AAAATAGTAG TATTGGATAA GGGCAAGGTA TTGGCAATAG GTAAAGATGA AGAGCTTTTA
CAAACTTGTT CTTTATATCA AAAATTTAAA AGCAAAGAAA AAACAAAGCC TAGCTTTAGT
TAA
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| Protein sequence | MHNEMNLKEV LIRFKPFYKR YWKQFAIAIF GMILASGGTA GSFYALEPIL NYIFVEKNEA
LLYTVPFLLV LMYFFKNLGT YLQSFYVSFI GTDMLRVLRA RVLKNILRLD MDFFKRYRSG
ELVSRCTNDI NALQSIVSNI IPDFFRELLT AIGLLLVVLY QSPTLAFFAL VILPLAIFPL
VWFAKKLKKY ARNIQETNSD LLSYLGEIFS NIELIKANDN EKKESDKFAK HNDTLCKLNL
KSARIDALTS PLMDMMGSVG VAVVIIVGGR EIINGSMSVG SFISFVSALF AIYTPLKRLT
SLYGKLQGAV AASERTFYLL DLEPQIKGGN KELKSIERIS FENVEFAYEN PHKSVLKGVN
FDFVKGQMLA LVGISGGGKS SIINLLMYFY EKQKGKILLN QEDISTFTIE SLHTKIGLVT
QNIYLFNDSF AANIAYSEEL EEEKVVQALK LANAYEFVKE MGGIWAEVKE HGKNLSGGQK
QRIAIARALY KNPDVLVFDE ATSALDNESE KAIVKTIENL KQDRLILVVA HRLSTIENAD
KIVVLDKGKV LAIGKDEELL QTCSLYQKFK SKEKTKPSFS
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