Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1203 |
Symbol | |
ID | 5390249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1053137 |
End bp | 1053916 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640862191 |
Product | 7-alpha-hydroxysteroid dehydrogenase |
Protein accession | YP_001398272 |
Protein GI | 153952514 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.605243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATACAG AATTTCAAGG AAAAACTTTA GTAATCAGCG GTGGAACTCG TGGGATAGGT AAGGCTATAG TTTATGAATT TGCTAAAGTG GGTGCAAATA TAGCTTTTAC TTATAATTCC AATGTGCAAA TTGCTGATGA AATGGTGCAA GATTTGGAGA AAAATTATAA AATCAAAGCT AGAGCTTATG AGTTTAATAT TTTAGAACCT GAAACTTATA AAGAACTTTT TGAAAAAATT GATGCGGATT TTGATAGAGT GGATTATTTT ATCTCAAATG CTATCATTTC AGGACGTGCG GTTGTAGGTG GTTATACTAA ATTTATGAAG TTAAAACCAA AAGGAATTAA TAACATCTTT ACAGCTACAG TTAATGCTTT CGTTGTAGGC GCGCAAGAAG CAGCTAAAAG GATGGAAAAA GTAGGGGGTG GAAGTATTAT TTCTATCTCA TCTACGGGAA ATTTAGTTTA TATAGAAAAT TATTCAGGTC ATGGTACAGC AAAAGCTGCT GTGGAAGCTA TGGCAAGATA TGCAGCTACT GAACTTGGAG AAAAAAATAT CCGCATAAAT GTCGTAAGTG GTGGGCCTAT TGAAACTGAT GCTTTAAGAG CTTTTACAAA TTATGAAGAA GTAAAACAAG CTACTATAAA TTTAAGTCCT TTAAACCGCA TGGGACAGCC TGAGGATTTA GCCGGAGCAT GTCTTTTTCT TTGTTCAAGT AAGGCAAGTT GGGTAACAGG ACATACTTTT ATTGTTGACG GTGGTACAAC TTTTAAATAA
|
Protein sequence | MNTEFQGKTL VISGGTRGIG KAIVYEFAKV GANIAFTYNS NVQIADEMVQ DLEKNYKIKA RAYEFNILEP ETYKELFEKI DADFDRVDYF ISNAIISGRA VVGGYTKFMK LKPKGINNIF TATVNAFVVG AQEAAKRMEK VGGGSIISIS STGNLVYIEN YSGHGTAKAA VEAMARYAAT ELGEKNIRIN VVSGGPIETD ALRAFTNYEE VKQATINLSP LNRMGQPEDL AGACLFLCSS KASWVTGHTF IVDGGTTFK
|
| |