Gene JJD26997_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1203 
Symbol 
ID5390249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp1053137 
End bp1053916 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content34% 
IMG OID640862191 
Product7-alpha-hydroxysteroid dehydrogenase 
Protein accessionYP_001398272 
Protein GI153952514 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.605243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAG AATTTCAAGG AAAAACTTTA GTAATCAGCG GTGGAACTCG TGGGATAGGT 
AAGGCTATAG TTTATGAATT TGCTAAAGTG GGTGCAAATA TAGCTTTTAC TTATAATTCC
AATGTGCAAA TTGCTGATGA AATGGTGCAA GATTTGGAGA AAAATTATAA AATCAAAGCT
AGAGCTTATG AGTTTAATAT TTTAGAACCT GAAACTTATA AAGAACTTTT TGAAAAAATT
GATGCGGATT TTGATAGAGT GGATTATTTT ATCTCAAATG CTATCATTTC AGGACGTGCG
GTTGTAGGTG GTTATACTAA ATTTATGAAG TTAAAACCAA AAGGAATTAA TAACATCTTT
ACAGCTACAG TTAATGCTTT CGTTGTAGGC GCGCAAGAAG CAGCTAAAAG GATGGAAAAA
GTAGGGGGTG GAAGTATTAT TTCTATCTCA TCTACGGGAA ATTTAGTTTA TATAGAAAAT
TATTCAGGTC ATGGTACAGC AAAAGCTGCT GTGGAAGCTA TGGCAAGATA TGCAGCTACT
GAACTTGGAG AAAAAAATAT CCGCATAAAT GTCGTAAGTG GTGGGCCTAT TGAAACTGAT
GCTTTAAGAG CTTTTACAAA TTATGAAGAA GTAAAACAAG CTACTATAAA TTTAAGTCCT
TTAAACCGCA TGGGACAGCC TGAGGATTTA GCCGGAGCAT GTCTTTTTCT TTGTTCAAGT
AAGGCAAGTT GGGTAACAGG ACATACTTTT ATTGTTGACG GTGGTACAAC TTTTAAATAA
 
Protein sequence
MNTEFQGKTL VISGGTRGIG KAIVYEFAKV GANIAFTYNS NVQIADEMVQ DLEKNYKIKA 
RAYEFNILEP ETYKELFEKI DADFDRVDYF ISNAIISGRA VVGGYTKFMK LKPKGINNIF
TATVNAFVVG AQEAAKRMEK VGGGSIISIS STGNLVYIEN YSGHGTAKAA VEAMARYAAT
ELGEKNIRIN VVSGGPIETD ALRAFTNYEE VKQATINLSP LNRMGQPEDL AGACLFLCSS
KASWVTGHTF IVDGGTTFK