Gene JJD26997_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1197 
SymbolkdsB 
ID5389136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp1048319 
End bp1049032 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content32% 
IMG OID640862185 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_001398266 
Protein GI153951624 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.434793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTA TCCCTGCAAG ATTAAAATCA AGTCGTTTTC ATGAGAAAAT TTTATGTGAT 
ATAGGCGGAG TGCCTATGTT TGTGGCTACT GCAAGAAGGG TAAGTAGCGT GGATGAAGTT
TGTATAGCTT TAGACGATGA AAAGGTTTTA AGTATCGCTA AAGAATATGG TCTAAATGCG
GTTTTAACAA GCAAAGATCA CGAAAGCGGT ACTGATAGGA TTAATGAAGC TTGTAAGAAA
TTATTTTTAA AAGATGATGA GATTATTATC AATGTGCAAG CTGATGAGCC CTTTATAGAA
TGTGAAAATT TATTAAAATT TAAAGAATTT GCAAGTTCTT TTTTGGATAA AAAAGCTTTT
ATGGTGAGTT GTTATAAAAA AATCACTCAA GAAGAAGCTA TGGATCCTAA TCTGGTTAAA
GTGCTTTGCG ATAAAGAAGG GTATGCTTTG TATTTTTCAA GAGCTAAAAT CCCTTATGAA
AGAGAAAATT ACGAGGAAAG TTTTAAAGGG CATTTAGGTA TTTATGCTTA TAGTGTAAAA
GCTTTAAGGG AGTTTTGTTC TTTGTCAAGT TCTGCCCTTG AAAGAGCGGA AAAGTTAGAG
CAGTTAAGAG CTATGGAAAA TGGTAAAAAA ATCAAAATGC TTGAAATTTC AACAAAAAGC
ATGGGGATTG ATACCAAAGA AGACTATGAA AAAGCTTTGC AAAGAATCAA ATAA
 
Protein sequence
MIIIPARLKS SRFHEKILCD IGGVPMFVAT ARRVSSVDEV CIALDDEKVL SIAKEYGLNA 
VLTSKDHESG TDRINEACKK LFLKDDEIII NVQADEPFIE CENLLKFKEF ASSFLDKKAF
MVSCYKKITQ EEAMDPNLVK VLCDKEGYAL YFSRAKIPYE RENYEESFKG HLGIYAYSVK
ALREFCSLSS SALERAEKLE QLRAMENGKK IKMLEISTKS MGIDTKEDYE KALQRIK