Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1197 |
Symbol | kdsB |
ID | 5389136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1048319 |
End bp | 1049032 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640862185 |
Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
Protein accession | YP_001398266 |
Protein GI | 153951624 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.434793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTATTA TCCCTGCAAG ATTAAAATCA AGTCGTTTTC ATGAGAAAAT TTTATGTGAT ATAGGCGGAG TGCCTATGTT TGTGGCTACT GCAAGAAGGG TAAGTAGCGT GGATGAAGTT TGTATAGCTT TAGACGATGA AAAGGTTTTA AGTATCGCTA AAGAATATGG TCTAAATGCG GTTTTAACAA GCAAAGATCA CGAAAGCGGT ACTGATAGGA TTAATGAAGC TTGTAAGAAA TTATTTTTAA AAGATGATGA GATTATTATC AATGTGCAAG CTGATGAGCC CTTTATAGAA TGTGAAAATT TATTAAAATT TAAAGAATTT GCAAGTTCTT TTTTGGATAA AAAAGCTTTT ATGGTGAGTT GTTATAAAAA AATCACTCAA GAAGAAGCTA TGGATCCTAA TCTGGTTAAA GTGCTTTGCG ATAAAGAAGG GTATGCTTTG TATTTTTCAA GAGCTAAAAT CCCTTATGAA AGAGAAAATT ACGAGGAAAG TTTTAAAGGG CATTTAGGTA TTTATGCTTA TAGTGTAAAA GCTTTAAGGG AGTTTTGTTC TTTGTCAAGT TCTGCCCTTG AAAGAGCGGA AAAGTTAGAG CAGTTAAGAG CTATGGAAAA TGGTAAAAAA ATCAAAATGC TTGAAATTTC AACAAAAAGC ATGGGGATTG ATACCAAAGA AGACTATGAA AAAGCTTTGC AAAGAATCAA ATAA
|
Protein sequence | MIIIPARLKS SRFHEKILCD IGGVPMFVAT ARRVSSVDEV CIALDDEKVL SIAKEYGLNA VLTSKDHESG TDRINEACKK LFLKDDEIII NVQADEPFIE CENLLKFKEF ASSFLDKKAF MVSCYKKITQ EEAMDPNLVK VLCDKEGYAL YFSRAKIPYE RENYEESFKG HLGIYAYSVK ALREFCSLSS SALERAEKLE QLRAMENGKK IKMLEISTKS MGIDTKEDYE KALQRIK
|
| |