Gene JJD26997_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1089 
Symbol 
ID5390441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand+ 
Start bp961302 
End bp962369 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content26% 
IMG OID640862090 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001398180 
Protein GI153951392 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTT ATATCCACAT TCCATTTTGT GAAAGCAAAT GTAATTATTG CGCTTTTACA 
AGTTTGAAAA AAAATGATTA TGAAAAAGCC TATTTTAAGG CTTTAAAAAA AGATATTATT 
TTTCAATTAA AACAATTTAA CATTCAATCA AATCAAATTA AAACCTTATT TATAGGCGGA 
GGAACGCCAA GTTGTGTCGA TGCGTATAAT TATGAAGATA TTTTTAAAAT TTTATATCCC 
TTACTAGATA AAAATGTAGA AATTTCATGC GAAGCTAATC CCAACTCAGC AACATTAAAT 
TGGCTTAAAA ATATGAAAAA TCTAGGAGTT AATCGCATTT CTTTTGGAGC TCAAAGTTTT 
CATCCTAAAA AACTTCACTT TCTTGGAAGA ATTCACAATC AAGAAATGAT TATCAAAGCA 
TTAGAAAACG CAAATAAAGC AGGTTTTAAA AATATCAATT TAGATCTTAT TTATGATACG 
AAATTAGACA ATAAAAAAAT GCTTGAATTT GAACTCTTGC ACTTGAAAAA AATCAAGGCT 
TTAATCACGC ACCTTAGTGC TTATAATTTA ACCATAGAAT CAAACACAGC CTTTGCCAAA 
AAAGAACATT TCAAAAAAAA TGCTCCTAAT TTAATAAAAT TTTTTATCAA ACAACTTCTA 
GAACTTGACT TTTTTCAATA TGAAATCAGC AATTTTTCAA AAACTAAATC CCAAATTTGC 
AAACATAATC TTGCTTATTG GCAAGGAAAA AACTACCTAG CTTGTGGATT AAGCGCGGTA 
GGATTTTATG AAAATAAGCG TTTTTATACA GCAAAAAATT TAAAAAATTA CATAGAAAAT 
CCTACTTTTA GATCTATAGA GCAACTAAGT TCTAAAGACT TGAATTTAGA ACACCTATTT 
TTAGGACTTA GAAGTATAGT AGGGATTGAT GAAACAAAAC TCAATCAATG GCAAAAAGAC 
AAAATAAATA TATTATTAAA AGAAAAAAAA CTTTTTTACA AAAATAAAAG ATATTTTAAT 
CCTAATTTTC TCATTAGCGA TGAACTTGCT TTATATCTCT CATCTTAA
 
Protein sequence
MHFYIHIPFC ESKCNYCAFT SLKKNDYEKA YFKALKKDII FQLKQFNIQS NQIKTLFIGG 
GTPSCVDAYN YEDIFKILYP LLDKNVEISC EANPNSATLN WLKNMKNLGV NRISFGAQSF 
HPKKLHFLGR IHNQEMIIKA LENANKAGFK NINLDLIYDT KLDNKKMLEF ELLHLKKIKA 
LITHLSAYNL TIESNTAFAK KEHFKKNAPN LIKFFIKQLL ELDFFQYEIS NFSKTKSQIC 
KHNLAYWQGK NYLACGLSAV GFYENKRFYT AKNLKNYIEN PTFRSIEQLS SKDLNLEHLF 
LGLRSIVGID ETKLNQWQKD KINILLKEKK LFYKNKRYFN PNFLISDELA LYLSS