| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1063 |
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| Symbol | |
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| ID | 5389913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 935681 |
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| End bp | 937606 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640862066 |
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| Product | macrolide-specific efflux protein macB |
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| Protein accession | YP_001398156 |
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| Protein GI | 153952463 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00606621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTC TTAAAAATAT TTGCAAAAAT ATAGGCGAAA ATGCCATTTT AAAAAATGTA
AGTTTAAGTA TAGAAAAAGG TGAATTTGTT GCCATTATAG GACAAAGTGG AAGTGGTAAA
ACTTCGCTTT TAAATATCAT AGGAACATTA GATACGCCAA GTAGTGGAAC TTATATTTTT
AATGAGTATG AAGTCACTAA ACTTAATAAC GATGAAAAAG CAAGATTAAG GCGTGAAAAA
ATAGGCTTTA TATTTCAAAG ATATAATCTT TTAAGTTTGC TTAGTGCTAA AGAAAATGTT
TCTTTACCTG CAGTTTATGC AGGAAAAAAT TTACAAGAAA GAAGTCAAAA CGCTAAAAAA
CTCTTAAATG ATTTAGAATT AGCTCACAAG TTAGATTCTA AGCCGAATGA ATTAAGCGGA
GGGCAGCAAC AACGCGTTTC TATAGCAAGA GCTTTAATCA ATGGTGGAGA GCTTATTTTG
GCTGATGAGC CAACGGGAGC TTTGGATAGT AAAAGCGGTA TTATGGTGCT TGAAATTTTA
CAAAAACTTA ACGCACAAGG TCATACTATA GTCTTAGTAA CTCACGATCC AAAAATTGCA
GCACAAGCTA AAAGGGTTAT AGAGATTAAA GATGGAGAAA TTTTAAGCGA TACTAAAAAG
GGAAAAGCTC AAGAAAAACT CACTTTAAAA ACAATGCCCA AAGAGAAAAA AACACTTACT
TTGCTTAAAA ATCAAGCCTT TGAGTGTTTT AAGATAGCTT ATTCTTCCAT ACTTGCACAC
AAACTTCGCT CTGTTTTAAC TATGCTTGGA ATCATCATAG GTATTGCTTC TGTAGTTTGT
GTTGTGGCTT TGGGATTGGG CTCTCAAGCT AAGGTGCTTG AGTCCATTAC AAGACTTGGG
ACAAATACTA TTGAAATTCG TCCTGGAAGG GGTTTTGGAG ATTTGCGTTC GGGTAAAACA
AGGCTTAATT TTAGTGATTT AGAAACGCTA AGATCTTTAG AATATTTAGA AGCAGTGGAT
GCTCATTCAA ATACTTCAGG AGTGGCAACT TATACCAATA TTTCTTTAAG TGCAAGAGCT
GAAGGAGTGG GGATAAATAA TTTTGCTATA GAAGGTTTAA GGATAGATGC GGGAAGAATT
TTAAATAATG ATGATGTAAA AAATAGTACC AATGTTGCTG TATTGGATTT TAATGCTAAA
AAAAATCTTT TTCCTGATGA AAAAAGTGAA AATATTTTAG GTCGTGTGGT GCTTTTTAAT
TCTCAACCTT TTAAGATTAT AGGAGTTTTG CAAAAAAATA CAGACAAGCC TATAGAAGAT
AATGTAGTGC GTCTTTATAT ACCCTATACA ACACTGATGA ATAAGCTTAC AGGAGATAGA
AATTTGCGTG AAATCATAGT TAAGGTTAAA GATGATGTGA GTTCAACTTT GGCTGAAAAT
GCTATTATAA GAATTTTAGA AATTAAACGC GGGCAAAAAG ATTTTTTTAC TTTTAATTCT
GACACTTTTA AGCAAGCTAT TACAGCAAAT AAACGCACTA CAACCATACT TACCGCTTGT
GTGGCTGTGA TTGCTTTGAT TGTTGGGGGT ATAGGAGTGA TGAATATCAT GCTTGTTTCT
GTAAGCGAAA GAACAAGAGA AATAGGCATA CGCATGGCTA TAGGGGCTAG AAGAGAAGAT
ATTATGATGC AGTTTTTAAT CGAAGCGGTT ATGATTTGTA CTATGGGGGC GATTTTGGGT
GTGATTTTAT CGATTTTTGT TATTTTTGCT TTTAATACTT TAAGTACGGA TTTTCCTATG
ATTTTAAATG CCTATTCTGT GCTTTTGGGA CTTTTAAGTT CTATGTTTAT CGGTGTGATT
TTTGGTTTTT TCCCTGCAAG AAATGCAGCA AATTTAAATC CTATTAGTGC ATTATCAAAG
GAATAA
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| Protein sequence | MIFLKNICKN IGENAILKNV SLSIEKGEFV AIIGQSGSGK TSLLNIIGTL DTPSSGTYIF
NEYEVTKLNN DEKARLRREK IGFIFQRYNL LSLLSAKENV SLPAVYAGKN LQERSQNAKK
LLNDLELAHK LDSKPNELSG GQQQRVSIAR ALINGGELIL ADEPTGALDS KSGIMVLEIL
QKLNAQGHTI VLVTHDPKIA AQAKRVIEIK DGEILSDTKK GKAQEKLTLK TMPKEKKTLT
LLKNQAFECF KIAYSSILAH KLRSVLTMLG IIIGIASVVC VVALGLGSQA KVLESITRLG
TNTIEIRPGR GFGDLRSGKT RLNFSDLETL RSLEYLEAVD AHSNTSGVAT YTNISLSARA
EGVGINNFAI EGLRIDAGRI LNNDDVKNST NVAVLDFNAK KNLFPDEKSE NILGRVVLFN
SQPFKIIGVL QKNTDKPIED NVVRLYIPYT TLMNKLTGDR NLREIIVKVK DDVSSTLAEN
AIIRILEIKR GQKDFFTFNS DTFKQAITAN KRTTTILTAC VAVIALIVGG IGVMNIMLVS
VSERTREIGI RMAIGARRED IMMQFLIEAV MICTMGAILG VILSIFVIFA FNTLSTDFPM
ILNAYSVLLG LLSSMFIGVI FGFFPARNAA NLNPISALSK E
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