| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1062 |
|---|
| Symbol | |
|---|
| ID | 5389422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 934309 |
|---|
| End bp | 935679 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640862065 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_001398155 |
|---|
| Protein GI | 153952165 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0664655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA TACTTAGCAT TTTTTTAGCA TTTTTCTTGA GCGCTTGTGG TGCAAAACTT
AGCTTGCCTA AAGAAGTTGA TTTAACTCAA GAGCAAATGA AAGATTTAAA TCTTACTTAT
GATTGGTATA GATCTTATGA TAATGCAAAA TTAAATGAAT TTTTGAATTT TGTTTTATTG
AATAATAGTG ATATTAATAT TGCTAGAAAA ACTTTGCTTT CGGCTTTGGC TAGAGCTGAT
TTGATTGATT ATGATTTATA TCCGACTTTA AGTGGAAATT TGGGTTTTGG TGGAGATAAA
GATTTAAATT CAGGCAAACA AAGTAAAAAT TTCAATAATT CTTTAAATTT AAGCTATGAG
CTTGATATTT ATGGCAAATT AAGAGATAGC GCAAGTGCGA GTGAATTTAG TGCAAAAGCA
AGTGCTTATG ATCTTGAAAA TTTAAAAATA AGTATGATCA ATACAGCTTT AAATGATGTT
TTTGAGCTGG CTTATTTTAA CGATGTAGAT AAATTGCTTC GAGCCTATCT TTCAAATTTA
GAACAAATGA AAGAGCTTTA TAGCTATAAA TACAAGCTTG GAAAAATAGA AGAATTAGAT
CTTTTAAATA TAAAACAAAG CTTATTAAAA GCTAAACAAA ATTTATTAGG CAATGATCAA
AATCGTAATT TACTCATAAA AAATTTACAA GATTTATTGA CAAAGCAAGA AGGTTTTGCT
TACATAGAGT ATTTTAAAAC TTTATCTTTA AATGATTTTA AAACCTTAAG TCCTGATTTT
AATATACCTT TAAAAGCTTT AGCGTACCGT GCAGATGTGA GATCTAAACT CAATAGCTTA
AAATCAGCTT TTAAGGATTA TTCTTCCATG CAAAAATCTA TTTTGCCTAG CATTTCTTTA
GGTGGAGCAT TAAGCGGGAG TGATAAAAAA ATTGATGATA GTTTTAAATT TGAAATTTTA
AGTGGCAATG TTAAGATTTC TTTACCTTTC TTAGATTATG GTAGGGTAAA GCAAAATATC
AAAATTTCAC AATTTGCTTA TGAGCAACTT TTAATTTCTT ATGAGCAAGC TTTACAAAGT
GCGATGAATG AATTTGCATT AAATTATAAA GATTATCAAA GCGACACCTT ACTTTTGCAA
AATTTGCATA ATATTAACGT TAAACAAGAG CTTATCACTA AGGCGTATTA TGAAAAATAT
ATTTTAGGAA AAAGTGAATT AAAAGATTAT TTGGATGCAA ACAATACTTT AAATTCTACC
CAGCAAGAAT TTTTAAGAGC TAGATTTAAT CTTTTAAAAA CCATTAATTC TTACTATCGA
ATCACGGCTT TAAGTTTTAA TGATGAAAAC TTAGAATTTC CTAAGTATTA A
|
|---|
| Protein sequence | MKIILSIFLA FFLSACGAKL SLPKEVDLTQ EQMKDLNLTY DWYRSYDNAK LNEFLNFVLL
NNSDINIARK TLLSALARAD LIDYDLYPTL SGNLGFGGDK DLNSGKQSKN FNNSLNLSYE
LDIYGKLRDS ASASEFSAKA SAYDLENLKI SMINTALNDV FELAYFNDVD KLLRAYLSNL
EQMKELYSYK YKLGKIEELD LLNIKQSLLK AKQNLLGNDQ NRNLLIKNLQ DLLTKQEGFA
YIEYFKTLSL NDFKTLSPDF NIPLKALAYR ADVRSKLNSL KSAFKDYSSM QKSILPSISL
GGALSGSDKK IDDSFKFEIL SGNVKISLPF LDYGRVKQNI KISQFAYEQL LISYEQALQS
AMNEFALNYK DYQSDTLLLQ NLHNINVKQE LITKAYYEKY ILGKSELKDY LDANNTLNST
QQEFLRARFN LLKTINSYYR ITALSFNDEN LEFPKY
|
|---|
| |