| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1043 |
|---|
| Symbol | hypE |
|---|
| ID | 5390274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 915917 |
|---|
| End bp | 916891 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640862048 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_001398138 |
|---|
| Protein GI | 153951221 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.606873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA TTTCCTTAGC CCACGGAGGG GGTGGAGAAG AGATGAATGA GCTTGTAACT
AAGCTTTTTA AGATCTTTGA CAATGAAATT TTAAACGCAA ATAATGATGC GGCGATTTTG
GGAAATTTGG CTTTAAGCAC GGATTCTTTT GTTTTAAGTC CGATTTTTTT AGATGAAGAG
GTCAATATAG GCAAACTTTG TGTTTGCGGT TCGATTAACG ATGTTTTGAT GGTGGGTGCC
AAACCAAAAT ATCTAAGCTT AGGGCTTATC TTAGAAGAAG GTTTTGAGCT AGCAAAACTA
GAACGCATTT TAAAAAGCAT TAAAGAAGAA TGTGAAAAAT GCGGAGTCAT GTTAGTTTGT
GGCGACACTA AAGTCGTTCC TAAGGGCAAG GCAGATGAAA TTTATATCAA CACTACAGCC
TTAGGCGAAA TGATTTCTAA AAAAGAAAGC AAAAATATCA AAGCAGGGTT TAGCCTACTT
CTTTCAGGCG ACATAGGAAG GCATGGAGCC AGTGTTTTAA TCAAAAGAAA TGAGCTAGAA
GCTGATATTA AAAGCGATTG TAAGGCTTTG GATAAAGAGG TTTTAGAACT TTTAGAAAAA
GATATAAAGG TTGTAGCCAT GAGAGATGCT ACTCGCGGGG GGCTTAGTGC GGTTTTAAAC
GAGTGGGCAA AGCAAAGCGG AAACGATCTT TTGATCTTTG AAGAAAAAAT CATCGTTCAA
GATGAGGTTT TAGGACTTTG CGAACTTTTT GGTTACGAAG CGTATGAGCT TGCCAATGAA
GGCACTTTCA TACTTTGCGT GGAAAAAGAA GACGAGTTAA AAGCCTTAGA AATTCTAAAA
AAATACAATG TAAATGCGAG TATCATAGGA GAAGTTTTAG AAGAGAAAAA AGCACGCGTG
ATTTTACAAA ACGCTTATGG GGCAAAACGC TTTTTAGAAA GCCCTAAAGG CGAACTTTTA
CCAAGAATTT GCTAA
|
|---|
| Protein sequence | MKNISLAHGG GGEEMNELVT KLFKIFDNEI LNANNDAAIL GNLALSTDSF VLSPIFLDEE
VNIGKLCVCG SINDVLMVGA KPKYLSLGLI LEEGFELAKL ERILKSIKEE CEKCGVMLVC
GDTKVVPKGK ADEIYINTTA LGEMISKKES KNIKAGFSLL LSGDIGRHGA SVLIKRNELE
ADIKSDCKAL DKEVLELLEK DIKVVAMRDA TRGGLSAVLN EWAKQSGNDL LIFEEKIIVQ
DEVLGLCELF GYEAYELANE GTFILCVEKE DELKALEILK KYNVNASIIG EVLEEKKARV
ILQNAYGAKR FLESPKGELL PRIC
|
|---|
| |