| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0940 |
|---|
| Symbol | |
|---|
| ID | 5390159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 838345 |
|---|
| End bp | 840537 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640861961 |
|---|
| Product | lectin C-type domain-containing protein |
|---|
| Protein accession | YP_001398053 |
|---|
| Protein GI | 153952515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00780626 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT ACCATTGGTT TAGATTTTTT AGTAAGAATA CATCGGTTGA ACAAGTTACT
CCTATTAAAA ATTTAAGACT TGCTATACTC CTTTTGGCGA GTCTTAGCTT TTCTCAAGCT
GCTATTCAAT GTAAAGATTA CAATGATTTT AAACAATTTA ATGGACACTA TTATACTGCT
ACTGTTCAAA AAATGACTTT TGAAGATGCA AGAAAACTAG CAGAAGATAG CGGTGGTTAT
TTAGCAATTC CTGATTCTAA AGCTGAAAAT GATTTCTTAA GTTCTTTGTT TAGGGGAGGA
CAATATGCTT GGATAGGTGT GTACGATCCA AGTTACATAA GTAATTATTG TGTTGAAGGT
AATGCAGGTT GTATTTATGA TGACAGTCGC TTCAAAACGG TTAAAGGTAG TCCATTAACT
TACAAAAATT GGGCGCAAAC ACAGCCTGAT AATTTATTGA AAAAATATGA TATTGTTAAT
GGGAAAGAGA GAGTATCTCC CTTAGGAGAA CATTGGGTTG CTATGGCTAG TCCTAGTGGG
CAATGGAGCG ATCAAGGCAA TCACTTTGGA GATACAAATA ATCCTGTGAG AAATTACGCT
CTTTTAGAGT TTGATAAAAT ACCTGATTGT GCAGGTGGTG ATGGTGGTGG TGATGGTGGA
CACAGTGCAA CAGATACTAT GCAATGCAAT ACAAATTTTA GCGATGATCC AAACTTTAAA
CTCACAAATG GACAAGGTCA ATCTATAGCT TGTTTGCAAA ACTCTCAACA AAAATACTTT
TGTCCTGCAC AATTAACACA ATGTGTTAAT TCAGATGATG CAGTAGATGG TAGTAGTGAA
AAAATAGAAG GTGGAGTTTT AAAAACGAGT AAAACAAAAG TAAGATTCAC CTTTTCCAAT
AGTATACGTT ATAGTGCGTG GCAAGTCGTA ACAAATGATA TATATATCAC CGATATTGAT
GCAATTGATA GTTTTAAACT TGTTTATGCA GGAGCTGATG ATTGGGTAGT TCCTTTTGCT
CCAAATTCTA CAGTTACCGT TATTCGTAAT GAGCCAAACA ATACTAAAGA TGCACTAGAT
TACATTCCTT ATCGCCCAAT AGATGCTAAT TATGATCGCC CAAATGATAA TTATGGTGGG
CTTTTTAGGT TTAGCGGTAA AAATTTAAAT ATAGAATTAA AACAATATTT ACACACAGGT
GTTAATAAGT CTGTAGCATT TTTTGCTACA GTTGGAAGAG GTGCTTGGCA ACTTACCTAT
GAAGCGACAG GAAAAGATAT AAGCTGTAGT AATTTTGGAA GAAATCTAAA TTGCACAGAA
GAAAGAAAAA CAATTCCTTT TCCTTTTAGT GCTTATAAAT ACACTTGCCC TGCAGGTTAT
CAACCAAAAG AACAAGGTGG AGTGTGTTCA CCACAAAGTG TAGATGATTT GATTGATACA
AATGGAGATG GTATAGGTGA TAGTTGCAAT TCTTCTATTG CTCCTGCTAA AAACTGCTTA
GGTGTAAAAA GAACTTGTCC TTTCAATAGT AGTAGAGAGT GTGTGTTAAT AGATAATAAA
TATCAATGCT CTCCTTTTCC TTGCTTTAAA GGAGTAAGTG ATATAGAAGA TACTGATACT
CCTGTTGGTG TTAATGATGC AAACAACAAT GGTTGGAATG ATGATGGTAC TTGCTCAGGA
CAAATCATTA TTTTTAATGG ACAAGATAAT CGTTGTAAAA ATTGGGATAT GTTTGGTGGT
TTATTTGGTG GTGGATGTTG TGATAAGAAT AATGTATTTT TAGGACTTGT AGCTTGCAAA
GAAGATGAAA AAAAGCTTGC TAGATTAAAT AATGCAGGAA AATGCCATGA AGTAGGAACT
TATTGTTCTA AAAAGATTAG CTTAGGTTTT ACCAAAATTT GCATTGAAAA AAAGAAAAGT
TTTTGTTGTT TTAATTCTAA ACTTGCAAGA ATCTTTAACG AACAAGGTCG TTCTCAGCTT
GGAAAAGGGT GGGGTAGTCC TAAAAGTACT CAATGCAGAG GCTTTAAACC TGAAGAATTT
CAAAAGCTAG ATTTTAGCGA AATTGATTTG AGTGAATTCA TTGCTGATAT TGTAGGAAGT
TTTGACACAG GAAAAATACA AGCTGATTCT GTGAAAATAC AAGAAAAGAT TCAAAACAAT
ATTGAGAATG CAACAAAAAA ACCTACAAAT TAA
|
|---|
| Protein sequence | MKNYHWFRFF SKNTSVEQVT PIKNLRLAIL LLASLSFSQA AIQCKDYNDF KQFNGHYYTA
TVQKMTFEDA RKLAEDSGGY LAIPDSKAEN DFLSSLFRGG QYAWIGVYDP SYISNYCVEG
NAGCIYDDSR FKTVKGSPLT YKNWAQTQPD NLLKKYDIVN GKERVSPLGE HWVAMASPSG
QWSDQGNHFG DTNNPVRNYA LLEFDKIPDC AGGDGGGDGG HSATDTMQCN TNFSDDPNFK
LTNGQGQSIA CLQNSQQKYF CPAQLTQCVN SDDAVDGSSE KIEGGVLKTS KTKVRFTFSN
SIRYSAWQVV TNDIYITDID AIDSFKLVYA GADDWVVPFA PNSTVTVIRN EPNNTKDALD
YIPYRPIDAN YDRPNDNYGG LFRFSGKNLN IELKQYLHTG VNKSVAFFAT VGRGAWQLTY
EATGKDISCS NFGRNLNCTE ERKTIPFPFS AYKYTCPAGY QPKEQGGVCS PQSVDDLIDT
NGDGIGDSCN SSIAPAKNCL GVKRTCPFNS SRECVLIDNK YQCSPFPCFK GVSDIEDTDT
PVGVNDANNN GWNDDGTCSG QIIIFNGQDN RCKNWDMFGG LFGGGCCDKN NVFLGLVACK
EDEKKLARLN NAGKCHEVGT YCSKKISLGF TKICIEKKKS FCCFNSKLAR IFNEQGRSQL
GKGWGSPKST QCRGFKPEEF QKLDFSEIDL SEFIADIVGS FDTGKIQADS VKIQEKIQNN
IENATKKPTN
|
|---|
| |