| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0926 |
|---|
| Symbol | |
|---|
| ID | 5389065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 824881 |
|---|
| End bp | 826377 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640861948 |
|---|
| Product | F-box only protein 18 |
|---|
| Protein accession | YP_001398040 |
|---|
| Protein GI | 153952379 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0098755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAATTT CTTGTTTACA AACTAAAAAT TCTCTCACTC AAGAGCAACA AGCTGTGGTT
GATTTTAATA TTGATGATAT ATTAATAGTG AATGCTTACG CAGGCACAGG AAAAACATCT
ACTCTAGTGC AATTTTGTGA AGCAAGAAAA GATTTTAACA TTTTGTATCT ATCTTATAAT
TCTTCCATGC GAAAAGAAGC TGAAACTAAA TTCAAACACT TAAAAAATGT AGAAGTTAAA
ACCATGCACT CTCTTGCATA CATAGAGTTA GAAGTTCAAA AAAAATATAA AGATAGATTA
GGAAGCTTAA GAGCTATAGA TTTATTTAAT TTTACAGGGG ATTTAAAAGA AGAGGTTAAA
AGTTTTTATG CAACTGCTAT TTTAAAAGCT GTTCGATATT TTTGCAACAG CAATCTTGAG
CTAAAAGAAT TTTTAAAAGA AATAGCAAAA GAGCCTTCCA AATATGAAAT TAGTCCGAAA
ATGGATTTAT CCTATATTTC AAAAAAAACA GAAAAATTGT GGAATGATTT ACAAAGTCAA
GATTGCGCTC TTGTCTATGA ACACGATTTT TATTTGAAAT CCTATCAACT TTCAAAGCCA
AAATTAGAAT ATGATTTTAT ATTAGTAGAT GAAGCACAGG ATATTAATGC TTGTGTTATT
GATATTGTGC TTAACCAAAA GCAAACTAAA AAAGTTTTTA TAGGAGATGC ATTTCAAAGC
ATTTATAAAT TCAGAGGTGC TGTGAATTCC TTAGAAGTAT TAGCATCTAT GCCAAAATCT
CATATTTTGT ATCTAACTCA AAGCTTTAGA TGCCCACAAA GTATAGCTAC TATTGCCAAT
TCTTATTTGG GAATTTTAAA TGCCTCAAGA GATTTTAAAG GAACGCTAAA ACCAAGAAAG
GAAAATAATG AAAATGAAGC AAAAGCTATA ATATGCAGAA CTAATGCTAA ACTATTTGAT
ATAGCAGTAG AAAATTTAAA TAAAAAATTA TTTTTTGTGG GAGGGGTAAA TAGTTATAGT
TTTGATGAAT TATTAGACAT ACAAAATCTT CTTTTTAAAA AACACAAATC TATCAAAAAT
CAGTTTATTG CAAAATTTGC CGACTTAAAA GAACTTCTTG AATATATCAA CGAAACTAAA
GAGGTTGATT TAAAACAAAA AATATTTGTT CTTTTTAAAT ATGTGCATAG CGATATTATA
AAGCTTATCA AAGATATTGA AAAAAGCTGT GTTAAAAAAC AAGAACAAGC TGATTTGATA
TTAAGCACAG GACACAAGAG CAAAGGTTTA GAGTGGAATA ATGTTGAAAT TATTAATGAT
TTTTTAAACA TCAAGCAAGA ACTTGAAGGA AGAGAACAAA TTACCATAGC AAAAGAAGAA
TTAAATCTTT TGTATGTGGC AGTTACAAGA GCTAAAAATT CTTTAAATAT CAACAAAGAT
TATTTGCTTG AAAAAGATTT TATGGAAAAA AATTTAGAAA GGATAATAAT AGAATGA
|
|---|
| Protein sequence | MSISCLQTKN SLTQEQQAVV DFNIDDILIV NAYAGTGKTS TLVQFCEARK DFNILYLSYN
SSMRKEAETK FKHLKNVEVK TMHSLAYIEL EVQKKYKDRL GSLRAIDLFN FTGDLKEEVK
SFYATAILKA VRYFCNSNLE LKEFLKEIAK EPSKYEISPK MDLSYISKKT EKLWNDLQSQ
DCALVYEHDF YLKSYQLSKP KLEYDFILVD EAQDINACVI DIVLNQKQTK KVFIGDAFQS
IYKFRGAVNS LEVLASMPKS HILYLTQSFR CPQSIATIAN SYLGILNASR DFKGTLKPRK
ENNENEAKAI ICRTNAKLFD IAVENLNKKL FFVGGVNSYS FDELLDIQNL LFKKHKSIKN
QFIAKFADLK ELLEYINETK EVDLKQKIFV LFKYVHSDII KLIKDIEKSC VKKQEQADLI
LSTGHKSKGL EWNNVEIIND FLNIKQELEG REQITIAKEE LNLLYVAVTR AKNSLNINKD
YLLEKDFMEK NLERIIIE
|
|---|
| |