Gene JJD26997_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0880 
Symbol 
ID5389824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp779589 
End bp780929 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content27% 
IMG OID640861905 
Productputative sodium transporter 
Protein accessionYP_001397997 
Protein GI153951231 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0426981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCAT ATTTTTCAAA AATCGGTTTT GTATTGGTTG TTGCTGGTGG AGCCGTTGGT 
TTGGGTAATG CTTGGAAATT TCCAACTTTA AGCGCAGAAA ATGGTGGTTT TGTTTTTGTG
CTTTTATATT TGTTTTTTAC TTTAACCATA GGATTTAGTA TTTTTTTGGC TGAAGTGACT
ATGGGACGTT TAAGTAAAAG TGATCTTGCA AATGCTTATT CAAATCTTGC CATAAAATAT
GGCAATAGAT GGCGATATGG CGGCGTTTTT ATGTTAGGTG GTATTTTTGT CCTCTCTTTT
TATCTAGTTA TCATGGGATG GGTTTTAAAA TATACTGTAG TTAGTCTTTA TTATCTTCCT
AAAACTTTAG ATGAAGCAGC AAGTAATTTT CAGAATTTAA TTACTACAAA TTTGACAAGT
TCTGTTTTTT TCTTCACTTT ATCTTTTTTT CTTACTTTAT TAGTAGTATC TAAAGGTTTA
ATCAAAGGGA TTGAAAAATT AAATGTTGTT ATAATGCCTA GCTTATTTTT AATGCTTGTT
TTTATGTTGT TTTATTGCAT GGGATTTAAG CAAGGTTTTG CAAATGCTTT TTCTTATTTA
TTTTATCCTG ATTTTTCACA TTTTAAATTT AGCTCTATTG CCGAAGCTTT AGGGCTTGCA
TTTTTTACCT TATGCTTGGG AATAGGTTGT ATAGTTACAT ATTCATCAGC CTTAGATAAA
AAAACAAATT TTATAAAAAG TTCAGTGTAT ATTGTTTTGA TTAATTTATT GATTTCTTTT
ATTATGGGAC TTATTGTTTT TACTTTTATT TTTGAATTTG GAGCCGATCC GCATACTCAA
GGAGTGGGAA TTGTTTTTGT ATCCTTGATG AGTTTGTTCA ATCAACTTGG AGCTTTAGGC
TATATTTTTG CATTTTGTTT TTTCTTAGCA CTTTTTTTTG CTGGTATTAC TTCAGCTGTT
TCAATGATAG AGCCTTTAAC TTTTTATATG ATCAATAACT ATCAAATTTC TCGCGCTAAA
GCTCTATTTT TCATAGGTTT ATTTGTTTTT GTTTTTGGAA TTTGTTGTAT TTTGTCGTTA
AATTTAAATT TTTTTTCTAT GTTTAGTTTT TTTGGTAAAG ATTTTTTTAC TTTATTAGAT
AAATTAACTT CAAATTTTTT ACTTCCACTT GGTGCCATAG TATGCTCTAT ATTTGTAGGT
TTTTTTATGA ATAAAAAACA AATTTATAAA ATTTTTTCTA AATTTATAAG TCGAAAAATT
TTCTTAATTT GGTTGTTTTT TATTCGTTTT ATATCGCCTA TAGCAATAAT TTTGGTAATG
TGTTATCAAA TTTTTGTATA A
 
Protein sequence
MRAYFSKIGF VLVVAGGAVG LGNAWKFPTL SAENGGFVFV LLYLFFTLTI GFSIFLAEVT 
MGRLSKSDLA NAYSNLAIKY GNRWRYGGVF MLGGIFVLSF YLVIMGWVLK YTVVSLYYLP
KTLDEAASNF QNLITTNLTS SVFFFTLSFF LTLLVVSKGL IKGIEKLNVV IMPSLFLMLV
FMLFYCMGFK QGFANAFSYL FYPDFSHFKF SSIAEALGLA FFTLCLGIGC IVTYSSALDK
KTNFIKSSVY IVLINLLISF IMGLIVFTFI FEFGADPHTQ GVGIVFVSLM SLFNQLGALG
YIFAFCFFLA LFFAGITSAV SMIEPLTFYM INNYQISRAK ALFFIGLFVF VFGICCILSL
NLNFFSMFSF FGKDFFTLLD KLTSNFLLPL GAIVCSIFVG FFMNKKQIYK IFSKFISRKI
FLIWLFFIRF ISPIAIILVM CYQIFV