Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0880 |
Symbol | |
ID | 5389824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | + |
Start bp | 779589 |
End bp | 780929 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640861905 |
Product | putative sodium transporter |
Protein accession | YP_001397997 |
Protein GI | 153951231 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0426981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGCAT ATTTTTCAAA AATCGGTTTT GTATTGGTTG TTGCTGGTGG AGCCGTTGGT TTGGGTAATG CTTGGAAATT TCCAACTTTA AGCGCAGAAA ATGGTGGTTT TGTTTTTGTG CTTTTATATT TGTTTTTTAC TTTAACCATA GGATTTAGTA TTTTTTTGGC TGAAGTGACT ATGGGACGTT TAAGTAAAAG TGATCTTGCA AATGCTTATT CAAATCTTGC CATAAAATAT GGCAATAGAT GGCGATATGG CGGCGTTTTT ATGTTAGGTG GTATTTTTGT CCTCTCTTTT TATCTAGTTA TCATGGGATG GGTTTTAAAA TATACTGTAG TTAGTCTTTA TTATCTTCCT AAAACTTTAG ATGAAGCAGC AAGTAATTTT CAGAATTTAA TTACTACAAA TTTGACAAGT TCTGTTTTTT TCTTCACTTT ATCTTTTTTT CTTACTTTAT TAGTAGTATC TAAAGGTTTA ATCAAAGGGA TTGAAAAATT AAATGTTGTT ATAATGCCTA GCTTATTTTT AATGCTTGTT TTTATGTTGT TTTATTGCAT GGGATTTAAG CAAGGTTTTG CAAATGCTTT TTCTTATTTA TTTTATCCTG ATTTTTCACA TTTTAAATTT AGCTCTATTG CCGAAGCTTT AGGGCTTGCA TTTTTTACCT TATGCTTGGG AATAGGTTGT ATAGTTACAT ATTCATCAGC CTTAGATAAA AAAACAAATT TTATAAAAAG TTCAGTGTAT ATTGTTTTGA TTAATTTATT GATTTCTTTT ATTATGGGAC TTATTGTTTT TACTTTTATT TTTGAATTTG GAGCCGATCC GCATACTCAA GGAGTGGGAA TTGTTTTTGT ATCCTTGATG AGTTTGTTCA ATCAACTTGG AGCTTTAGGC TATATTTTTG CATTTTGTTT TTTCTTAGCA CTTTTTTTTG CTGGTATTAC TTCAGCTGTT TCAATGATAG AGCCTTTAAC TTTTTATATG ATCAATAACT ATCAAATTTC TCGCGCTAAA GCTCTATTTT TCATAGGTTT ATTTGTTTTT GTTTTTGGAA TTTGTTGTAT TTTGTCGTTA AATTTAAATT TTTTTTCTAT GTTTAGTTTT TTTGGTAAAG ATTTTTTTAC TTTATTAGAT AAATTAACTT CAAATTTTTT ACTTCCACTT GGTGCCATAG TATGCTCTAT ATTTGTAGGT TTTTTTATGA ATAAAAAACA AATTTATAAA ATTTTTTCTA AATTTATAAG TCGAAAAATT TTCTTAATTT GGTTGTTTTT TATTCGTTTT ATATCGCCTA TAGCAATAAT TTTGGTAATG TGTTATCAAA TTTTTGTATA A
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Protein sequence | MRAYFSKIGF VLVVAGGAVG LGNAWKFPTL SAENGGFVFV LLYLFFTLTI GFSIFLAEVT MGRLSKSDLA NAYSNLAIKY GNRWRYGGVF MLGGIFVLSF YLVIMGWVLK YTVVSLYYLP KTLDEAASNF QNLITTNLTS SVFFFTLSFF LTLLVVSKGL IKGIEKLNVV IMPSLFLMLV FMLFYCMGFK QGFANAFSYL FYPDFSHFKF SSIAEALGLA FFTLCLGIGC IVTYSSALDK KTNFIKSSVY IVLINLLISF IMGLIVFTFI FEFGADPHTQ GVGIVFVSLM SLFNQLGALG YIFAFCFFLA LFFAGITSAV SMIEPLTFYM INNYQISRAK ALFFIGLFVF VFGICCILSL NLNFFSMFSF FGKDFFTLLD KLTSNFLLPL GAIVCSIFVG FFMNKKQIYK IFSKFISRKI FLIWLFFIRF ISPIAIILVM CYQIFV
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