Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0837 |
Symbol | |
ID | 5388780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 754549 |
End bp | 755916 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640861869 |
Product | DNA transfer in the process of conjugation and F pilus assembly protein |
Protein accession | YP_001397962 |
Protein GI | 153951180 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00362529 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCTTA AAAAATCCGA AGAAGAAAAA ACATTTATCG GCATAGGCTT TGATTTAGAG GATAAAAAAC AAGAGAAGCT TTTAGAAATA TATCAAATGG ATGATAATTC TAAAAATCAC ACTTTTGTAT TTGGCTCCAC AGGTGTAGGT AAAACAAGAC TCATTGAAGG ACTTATTGAA CAAGATATTC CAAAAGGGAA AAATGTTGTT ATCATTGATC CTAAAGGCGA TATAGGGCTG TTTTCAAAAA TGGTTGAAAT TGCTAAAAAA AGTAATAGAG AAAAAGAGCT TATGTTTTTA AGTCCTATTT ATCCTGAATA TTCTATCAAA ATTAATCCGT TAGCAAATTA CTACATGGAA GAAGAAATCA TTGCTCATAT TGTTTCAGGT GTTCCTGCAA AAGATGAGTT CTTTTATAAT GTTGCAAATG AAACAACCAC AGCTGTTGTA AAAGCTTTGC TTATTATTAG GCGTTATGAA AAGCTAGAAA AACCTTTAAA TTTTGAAGAA ATTGCTGAAA AAGTTTATTA CGAAGGTTTA AAAGAGCTTC AATCAGAATT AAAAGAAATA CAAAGTAATG GTTTTGAAGA TGATGAGATT GCTAGATTGC TTGCTCTATA CGATAGGGTT TTATCATCGC CACAAGATTA TTTTGCCAAG GTTTCATCAA CTCTTAGAAC CACGCTTACT CAAATGACCA TGGGTAATGT AGGAAAAATT ATAGGTACCG CACAAGAAAA CACTTTTATT AAAAGATTAC AAGAAAATCA AGGTGTGCTT TTATATATTA TGACAGGTTC TATGCTTACA AGGCAAGTAT CAAGTATTAT TTCTAAAGTA ACCATCTCCA TGATTCAATC TTGTGTGGGC AGGGTTTATG CCTCAGGAAA AAAATTTGAT AAAACATTAA AAATTTACAT TGATGAGGCT GCTTCTTCTG TGTATAGGGG TATAGAAACT TTATATGCTC AAGCAAGGGG TGCAGGAGTA GCTATTATGG GATTAACTCA ATCAGCAGCT GACTTAGCAG CTGAAATAGG ACAAGATGGG GCAAACAGAT TATTAGAACT TACCAACACT AAAATAATTA TGCGTTTAAA TGATACAAAA AGCTCTAAAA TGATTTCAGA TCTAGGGGGT AAAAAAAGAG CTTATTCTTA TTTTTTAACC GTAGAAGGAG GAATTACTTC AAGAGAGGTT GAAGAATTAA ATATTGAGGT TGATGATGTG ACCAACCTAC AAAAAAGAGA ATTTTTTTAT TTTGGTTTTG AAGGGCGTTT TAAAGGAAAG ACTTTAAAAG TGAATGATGG AAAATTAGTT GTGGATATGC CTAATGTAAC TCAAAAAAAC GAGGATTTTA ATGTTTGA
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Protein sequence | MILKKSEEEK TFIGIGFDLE DKKQEKLLEI YQMDDNSKNH TFVFGSTGVG KTRLIEGLIE QDIPKGKNVV IIDPKGDIGL FSKMVEIAKK SNREKELMFL SPIYPEYSIK INPLANYYME EEIIAHIVSG VPAKDEFFYN VANETTTAVV KALLIIRRYE KLEKPLNFEE IAEKVYYEGL KELQSELKEI QSNGFEDDEI ARLLALYDRV LSSPQDYFAK VSSTLRTTLT QMTMGNVGKI IGTAQENTFI KRLQENQGVL LYIMTGSMLT RQVSSIISKV TISMIQSCVG RVYASGKKFD KTLKIYIDEA ASSVYRGIET LYAQARGAGV AIMGLTQSAA DLAAEIGQDG ANRLLELTNT KIIMRLNDTK SSKMISDLGG KKRAYSYFLT VEGGITSREV EELNIEVDDV TNLQKREFFY FGFEGRFKGK TLKVNDGKLV VDMPNVTQKN EDFNV
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