| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0775 |
|---|
| Symbol | |
|---|
| ID | 5389878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 698674 |
|---|
| End bp | 701919 |
|---|
| Gene Length | 3246 bp |
|---|
| Protein Length | 1081 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640861814 |
|---|
| Product | CcmF/CcyK/CcsA family cytochrome c biogenesis protein |
|---|
| Protein accession | YP_001397908 |
|---|
| Protein GI | 153951050 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.239289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATAAAAAATA TAATAAAAAG CATAGGGGAT TTAAGAGTTT CGGTTGTATT GTTTTTGCTT
TTTGCGTTTT TTTGTGCTTT GGCAACTTTT ATTGAAAGTG CTTATGGAAC TCCTACGGCT
TGGGCAATGG TTTATGATAC TTTTTGGTTT GAATATATAC AACTTTTACT TGGTATTAAT
TTGCTATGTG GGATGTTTCG TTATAAAATG TTTGGACTTA AAAAATTGTC TTTAATGGTT
TTTCATATTT CTTTTTTATT TATTTTAGTG GGTTCTGCAA TGACAAGATA TGCCGGGTTT
GAAGGTATTT TAGCTATTAG AGAACATACT CAAAATTCAC TTATAGAAAG TTCTAAGACT
TCCTTGCGTA TTTCTGCTAT AAAAGATGGG GAACGCTATA GTGCGGTTAA TGATCGTTAT
ATAGGAAATT TGCCTTTTGC TAATTCTTTT AAACTAAAAC TTAATTTAGG CGATGATCAA
GTGGTATTAA AATATAAAGA TTTAATCTTA AATGCTCATT ATACTTATAA AGAAAATAAT
AATTCTGATC CTTTATTGGT TTTGATGCTT TCTCAAAAAG GATCTCAAGG TGTTGATGTT
AAATTTGAAA AAGGTGAAGT TAAGAATATA GAAGGGGTTA ACTTTGCTTT TATGAATGAT
AATGTTAAAG CACCTTTTGT AAAAATTGAT GAAAATTTAA CTTTAAGTTC AAGTGAAAAC
TTACATTTTC TAAGTATGCT AAATGGACAA AATTTAGACC TTAAAATTGG AGAAAAGGCA
AATGCTAAGG AAAGAAGGCT TTATGAAATT AATGATATTA GTTTTGTAGT TAAAGCTGCT
TCTTTGCACG CGCAAGAAGC TTTAGAAGGT TCTAATAGAC CTCAAGATGA AAGTTTTTGG
TTATGGTTTA AATCTGCTTG GTTAGAAGTG GGTAGAACTA TGTTGATTTC TACTTTTGGC
GAGCCTCAAA ATTGGAAAAA TTCTTTATTA TTGCATTTTA AAGATTTTGC TTTAAGCAAT
GAGAATAAAA ACTTAGAATT AACTGGTTCT AGTGCTTTAA AATTAGAATT AAGCTATAAA
AATGAAAGTA AAGAATTTTA TATTTTTGAA TATAATAAAC CTATTATGAT AGAACTTTCA
GGTCAAAAAT TCTTTATTTC TTGGGCACTT TCTTATGAAC AATTGCCTTT TGATATTTAC
TTAAGAGATT TTGTATTAGA TCGTTATCCA GGTTCTATGT CTCCAGCTTC TTATGCAAGT
GAAATTACCG TAAAAAATAA TAATGAAAAT TTTGATTATA GAATTTTTAT GAATAATGTT
TTAGATTATG ATGGCTATAG ATTTTATCAA AGTTCTTATG ATCAAGATGA AAAAGGGACT
GTTTTATCTG TAAATAAAGA TCCAGGCAAA ATACCAACTT ATATAGGTTA TTTTTTGCTT
TGTCTTGGAA TGTTTATGAA TTTTTTAAAT CCACATTCTA GATTTAGAAC TTTGGCAAGA
TTAATTAATA AAGATACTTT AAAACATACA AGTGTGATTA TTTTTATTTT ATTGTTATCT
TTTAGTTCTG AAAAGACTTT TGCTCAAGAT TTAAATTCGA CTTTACCTGT GGTAAATACC
AATCATGCTA AAGCTCTTGC TACTTTAATA GTTCAAAAAT CAGCAGATGG AAGAATGGTG
CCTTTTGATA CGCTATCAAG AGAAATTTTA GAAAAAATTC ATCAAAGCAA TAGCTATAAG
GGTCAAAATT CTAATGCTGT TATGCTTTCC ATGCTCGTTG ATGTAGATAA ATGGCAAATG
GAACCTTTTA TTTTAATGCC ACAAAATCAA GCAGTTCGTG ATGCTATTGC AAATATTTTA
GAAATTCCTA GTGCTAAATA TATTGCTTAT AAAGATTTTT TTGATGAGAA TAACCGCTAT
AAACTTCAAA AATATGTTGA AAATGCAAAT CGTAAAAACC CAAATGCAAG AGGAGTTTTT
GATAAGGAAA TTATAAAACT AGATGAAAGA GTTAATGTTG TAAATTTGGT TTTTAGTGGT
GAATTATTTA AATTTATTCC TGTTCAAAAT AATCCAAATA ATGTTTGGCT TGCACCTTTT
TCTGCTGTAA CTACTCTTAA GGGGGATGAA GGATATATTG TTTTGGCTTT AATACAGAAT
TATTTTAGTG CCGTGGAAAA TGCTTTTAAA GATGGTAATT GGACTAGAAC TGATGAAGGC
TTGAAATTTA TCAAAGAATA TCAAGAAAAA ATAGGATATA AAGTCATGCC TAGCAAAACC
AAGGTTGAAA TGGAAATTTT TTCCAATAAG GCTGAAATTT TCGTTAAACT CGCTCCTGTA
TATTTAATTG CGGGTTTTTT ACTTTTGATT CTTGTTTTTT TTAAAATGGT CGTGCCGAAT
TTAAAAATCT ATTTTATATT TAAAGTGGTA TATGTTTTAA ATGTTTTAGC TTTTGTAATT
CATACAGTAG GTCTTGGACT TCGTGCTTAT TTATCAGGTC ATGCTCCATG GAGTAATGGC
TATGAAAGCA TGGTATATAT AGCTTGGGCG TTGTCTTTGT CGGGTATATT TTTCTCTAGA
AAAAGTCCTA TAGCCTTGTC ATTAACTTCT ATTTTATCCG GTGTTGTATT AATGGTTGCA
CATTTAAGCG AAATGAATCC GCAAATTACA AATCTTGTTC CTGTGCTTAA TTCTTATTGG
CTTAGTATTC ATGTATCTGT TATTACTGCT AGTTATGGAT TTTTAGGACT TTGTGCCTTG
CTTGGTATCT TTACATTGTT CTTAATGTGT TTTCTTAATA AAGATGGAAA ATATAATCTT
AATATTTTAA GAAATATTAC AGAGGCTACA AGAATTAATG AAATGGCAAT GATTTTTGGA
CTTTGTTTGC TTACTGTAGG AAATTTTTTA GGTGCAATTT GGGCAAATGA AAGTTGGGGA
AGATATTGGA GTTGGGATTC TAAGGAAACT TGGGCTTTAG TTAGTATTTT GGTTTATGCA
GCAATTTTGC ATCTTAGAAT GATTCCAAAA TATTGCAATC AATTTGTGTT TGCTTTATGG
AGTATGTTTG CTTATTGGGT TATTATTATG ACTTATTTTG GAGTAAATTA CTTTTTAACA
GGACTTCATT CTTATGCCGC AGGCGAAGCG GCTCAAATTC CTAATTATGT TTATTGGGGA
TTTGCGTTGA TGGTGGTTTT AGCTTTTTTT GCAAGAAGGA AGCGAAATTT TGTGGGCAAA
CTTTAA
|
|---|
| Protein sequence | MKNIIKSIGD LRVSVVLFLL FAFFCALATF IESAYGTPTA WAMVYDTFWF EYIQLLLGIN
LLCGMFRYKM FGLKKLSLMV FHISFLFILV GSAMTRYAGF EGILAIREHT QNSLIESSKT
SLRISAIKDG ERYSAVNDRY IGNLPFANSF KLKLNLGDDQ VVLKYKDLIL NAHYTYKENN
NSDPLLVLML SQKGSQGVDV KFEKGEVKNI EGVNFAFMND NVKAPFVKID ENLTLSSSEN
LHFLSMLNGQ NLDLKIGEKA NAKERRLYEI NDISFVVKAA SLHAQEALEG SNRPQDESFW
LWFKSAWLEV GRTMLISTFG EPQNWKNSLL LHFKDFALSN ENKNLELTGS SALKLELSYK
NESKEFYIFE YNKPIMIELS GQKFFISWAL SYEQLPFDIY LRDFVLDRYP GSMSPASYAS
EITVKNNNEN FDYRIFMNNV LDYDGYRFYQ SSYDQDEKGT VLSVNKDPGK IPTYIGYFLL
CLGMFMNFLN PHSRFRTLAR LINKDTLKHT SVIIFILLLS FSSEKTFAQD LNSTLPVVNT
NHAKALATLI VQKSADGRMV PFDTLSREIL EKIHQSNSYK GQNSNAVMLS MLVDVDKWQM
EPFILMPQNQ AVRDAIANIL EIPSAKYIAY KDFFDENNRY KLQKYVENAN RKNPNARGVF
DKEIIKLDER VNVVNLVFSG ELFKFIPVQN NPNNVWLAPF SAVTTLKGDE GYIVLALIQN
YFSAVENAFK DGNWTRTDEG LKFIKEYQEK IGYKVMPSKT KVEMEIFSNK AEIFVKLAPV
YLIAGFLLLI LVFFKMVVPN LKIYFIFKVV YVLNVLAFVI HTVGLGLRAY LSGHAPWSNG
YESMVYIAWA LSLSGIFFSR KSPIALSLTS ILSGVVLMVA HLSEMNPQIT NLVPVLNSYW
LSIHVSVITA SYGFLGLCAL LGIFTLFLMC FLNKDGKYNL NILRNITEAT RINEMAMIFG
LCLLTVGNFL GAIWANESWG RYWSWDSKET WALVSILVYA AILHLRMIPK YCNQFVFALW
SMFAYWVIIM TYFGVNYFLT GLHSYAAGEA AQIPNYVYWG FALMVVLAFF ARRKRNFVGK
L
|
|---|
| |