| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0771 |
|---|
| Symbol | livH |
|---|
| ID | 5389444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 695259 |
|---|
| End bp | 696155 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640861810 |
|---|
| Product | high affinity branched-chain amino acid ABC transporter, permease protein |
|---|
| Protein accession | YP_001397904 |
|---|
| Protein GI | 153951345 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.171374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCTA CTTTATTTTT ACAACAACTT GTTAATGGAC TTAGTTTGGG CAGTATGTAT
GCCCTTATTG CTGTTGGCTA TACGATGGTT TATGGCGTGT TAAGACTTAT TAATTTTGCT
CACGGCGATA TTATGATGGT TGGTGCTTAT GCAGCTCTTT TTTGCATGAC TAATCTAAAT
GTTCCTTTTC TAGGAGCTTT GTCTTTGGCG ATGATTTTTG CTGCCTGTGT TGGAATAGCT
ACAGATAGAA TCGCTTATAA ACCTTTAAGA CAGACTCCTA GAATTTCATT GTTAATTACG
GCAATTGGTA TTAGTTTTTT CTTGCAAAAT CTTTTTAATA TGCTTTTTAC TTCAACACCT
AGAACTTTTG CACCGCCAAG TTATTTTGAG GAAAGTGTTA ATTTTGGTGG AGTGATAACA
ACTTATGGTT CTTTAATGGT TCCTGCTCTT ACATTTGTTA TTTTAATAAC AGTGTTATGG
ATTTTGTATA AAAGCAAATA TGGTATAGCT ATTCGTGCTT TGGCATTTGA TATACAAACA
GTAAATTTAA TGGGTATAGA TGCAAATCGT ATGATTGCTG TAGTTTTTGC CCTAGGTTCA
GCTTTGGCAG CAGTTGGGGG TGTTTTTTGG GCTGCAAATT ATTACTCTGT TGAACCTACT
ATGGGAACTT TAATAGGTTT GAAAGCTTTT GCTGCTGCAG TTTTAGGAGG TATAGGTTCT
GTAGTAGGTG CAGTTTTGGG TGGACTTATT ATAGGATTTA CTGAAGTTGT TGTTGTGGCT
TTTTTTCCAG ATTTATCAGG CTTTAAAGAT GCATTTGCTT TTATTTTTTT GGTGTTTATA
TTGTTATTTA GGCCTACAGG AATTTTAGGT ATAAATTTTG AAAAGAGTAG GTTTTGA
|
|---|
| Protein sequence | MDSTLFLQQL VNGLSLGSMY ALIAVGYTMV YGVLRLINFA HGDIMMVGAY AALFCMTNLN
VPFLGALSLA MIFAACVGIA TDRIAYKPLR QTPRISLLIT AIGISFFLQN LFNMLFTSTP
RTFAPPSYFE ESVNFGGVIT TYGSLMVPAL TFVILITVLW ILYKSKYGIA IRALAFDIQT
VNLMGIDANR MIAVVFALGS ALAAVGGVFW AANYYSVEPT MGTLIGLKAF AAAVLGGIGS
VVGAVLGGLI IGFTEVVVVA FFPDLSGFKD AFAFIFLVFI LLFRPTGILG INFEKSRF
|
|---|
| |