| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0761 |
|---|
| Symbol | gyrA |
|---|
| ID | 5389941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 685775 |
|---|
| End bp | 688363 |
|---|
| Gene Length | 2589 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640861800 |
|---|
| Product | DNA gyrase subunit A |
|---|
| Protein accession | YP_001397894 |
|---|
| Protein GI | 153951683 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000813267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAATA TTTTTAGCAA AGATTCTGAT ATTGAACTTG TAGATATAGA AAATTCTATA
AAAAGTAGTT ATTTAGACTA TTCTATGAGT GTTATTATAG GTCGTGCTTT GCCTGATGCA
AGAGATGGTT TAAAGCCTGT TCATAGAAGA ATTTTATATG CTATGCAAAA TGATGAGGCA
AAAAGTAGAA CAGATTTTGT CAAATCAGCC CGTATAGTGG GTGCTGTTAT AGGTCGTTAT
CACCCGCATG GAGATACAGC AGTTTATGAT GCTTTAGTTA GAATGGCTCA AGATTTTTCT
ATGAGATATC CAAGTATTAC AGGACAAGGT AACTTTGGAT CTATAGATGG CGATAGTGCT
GCTGCGATGC GTTATACTGA AGCAAAAATG AGTAAACTTT CTCATGAGCT TTTAAAAGAT
ATAGATAAAG ATACGGTCGA TTTTGTTCCA AATTATGATG GTTCAGAAAG TGAACCTGAT
GTTTTACCTT CTAGGGTTCC AAATTTATTA TTAAATGGTT CAAGTGGTAT AGCTGTAGGT
ATGGCGACAA ATATCCCACC TCATAGTTTA AATGAGTTGA TAGATGGACT TTTATATTTG
CTTGATAATA AAGATGTAAG CTTAGAAGAG ATTATGCAGT TTATCAAAGG TCCAGATTTT
CCAACAGGTG GAATAATTTA TGGTAAAAAA GGCATTATAG AAGCTTATCG CACAGGGCGT
GGTCGTGTGA AAGTGCGCGC TAAAACTCAT ATTGAAAAAA AGACAAATAA AGATGTTATT
GTTATAGATG AGCTTCCTTA TCAAACCAAT AAAGCTAGGC TTATAGAGCA GATTGCAGAG
CTTGTTAAAG AAAAGCAAAT TGAAGGAATA TCTGAAGTAA GAGATGAGAG CAATAAAGAA
GGAATCCGTG TTGTTATAGA GCTTAAACGT GAGGCTATGA GTGAAATTGT TTTAAATAAT
CTATTTAAAT CTACCACTAT GGAAAGTACT TTTGGTGTGA TTATGTTAGC AATTCACAAT
AAAGAACCTA AAATTTTCTC TTTGCTAGAA CTTTTAAATC TTTTCTTAAC CCATAGAAAA
ACAGTTATTA TTAGAAGAAC GATTTTTGAA CTTCAAAAGG CAAGAGTAAG AGCTCATATT
TTAGAAGGTC TTAAAATTGC ACTTGATAAT ATAGATGAAG TGATTGCTTT AATTAAAAAT
AGTTCCGACA ATAATACCGC AAGAGATTCT TTGGTAGCTA AATTTGGTCT TAGTGAACTT
CAAGCGAATG CTATTTTAGA TATGAAACTG GGTCGTTTAA CAGGACTTGA AAGAGAAAAA
ATTGAAAATG AACTTGCAGA ATTAATGAAA GAAATTGCAA GACTTGAAGA AATTTTAAAA
AGTGAAACTT TGCTTGAAAA TTTAATTCGC GATGAATTAA AAGAAATTAG AAGCAAATTT
GATGTACCAC GTATTACTCA AATTGAAGAT GATTATGATG ATATTGATAT TGAAGATTTG
ATTCCTAATG AAAATATGGT TGTAACTATC ACGCATCGTG GTTATATTAA GCGTGTGCCT
AGTAAACAAT ATGAAAAGCA AAAACGAGGC GGAAAAGGAA AATTAGCCGT TACGACTTAT
GATGATGATT TTATAGAAAG TTTCTTTACG GCAAATACAC ATGATACGCT TATGTTTGTA
ACAGATCGTG GACAGCTTTA TTGGCTTAAA GTTTATAAAA TTCCTGAAGG CTCAAGAACG
GCTAAAGGAA AAGCAGTGGT AAATCTTATC AATTTACAAG CTGAAGAAAA AATCATGGCT
ATTATTCCAA CCACGGATTT TGACGAGAGT AAATCTTTAT GTTTCTTTAC TAAAAATGGT
ATTGTAAAGC GTACAAATTT GAGTGAATAT CAAAATATCA GAAGTATTGG AGTTAGAGCG
ATCAACTTAA ATGAAAATGA TGAGTTGGTA ACTGCTATTA TTGTTCAAAG AGATGAAGAT
GAAATTTTTG CCAGTGGTGG TGAAGAAAAT TTAGAAAATC AAGAAATTGA AAATTTAGAT
GATGAAAATC TTGAAAATGA AGAAAGTGCA AGTACACAAG GTAAAATGCT CTTTGCAGTA
ACCAAAAAAG GTATGTGTAT CAAATTCCCG CTTGTTAAAG TGCGTGAAAT CGGCCGTGTA
AGTCGTGGGG TGACAGCTAT TAAGTTTAAA GAGAAAAATG ACGAATTAGT AGGTGCAGTT
GTTATAGAAA ATGATGAGCA AGAAATTTTA AGCGTAAGTG CAAAAGGTAT AGGAAAACGC
ACCAATGCTG GAGAATATAG ATTGCAAAGT AGAGGTGGTA AGGGTGTAAT TTGCATGAAG
CTTACAGAAA AAACTAAAGA TCTTATTAGT GTAGTTATAG TAGATGAAAC TATGGATTTG
ATGGCTCTTA CAAGTTCAGG CAAGATGATA CGTGTTGATA TGCAAAGCAT TAGAAAAGCA
GGGCGTAATA CGAGTGGCGT CATCGTGGTT AATGTGGAAA ATGACGAGGT GGTTAGCATC
GCTAAGTGTC CTAAAGAGGA AAATGATGAG GATGAGTTAA GCGATGAAAA CTTTGGTTTA
GATTTGTAA
|
|---|
| Protein sequence | MENIFSKDSD IELVDIENSI KSSYLDYSMS VIIGRALPDA RDGLKPVHRR ILYAMQNDEA
KSRTDFVKSA RIVGAVIGRY HPHGDTAVYD ALVRMAQDFS MRYPSITGQG NFGSIDGDSA
AAMRYTEAKM SKLSHELLKD IDKDTVDFVP NYDGSESEPD VLPSRVPNLL LNGSSGIAVG
MATNIPPHSL NELIDGLLYL LDNKDVSLEE IMQFIKGPDF PTGGIIYGKK GIIEAYRTGR
GRVKVRAKTH IEKKTNKDVI VIDELPYQTN KARLIEQIAE LVKEKQIEGI SEVRDESNKE
GIRVVIELKR EAMSEIVLNN LFKSTTMEST FGVIMLAIHN KEPKIFSLLE LLNLFLTHRK
TVIIRRTIFE LQKARVRAHI LEGLKIALDN IDEVIALIKN SSDNNTARDS LVAKFGLSEL
QANAILDMKL GRLTGLEREK IENELAELMK EIARLEEILK SETLLENLIR DELKEIRSKF
DVPRITQIED DYDDIDIEDL IPNENMVVTI THRGYIKRVP SKQYEKQKRG GKGKLAVTTY
DDDFIESFFT ANTHDTLMFV TDRGQLYWLK VYKIPEGSRT AKGKAVVNLI NLQAEEKIMA
IIPTTDFDES KSLCFFTKNG IVKRTNLSEY QNIRSIGVRA INLNENDELV TAIIVQRDED
EIFASGGEEN LENQEIENLD DENLENEESA STQGKMLFAV TKKGMCIKFP LVKVREIGRV
SRGVTAIKFK EKNDELVGAV VIENDEQEIL SVSAKGIGKR TNAGEYRLQS RGGKGVICMK
LTEKTKDLIS VVIVDETMDL MALTSSGKMI RVDMQSIRKA GRNTSGVIVV NVENDEVVSI
AKCPKEENDE DELSDENFGL DL
|
|---|
| |