Gene JJD26997_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0688 
SymboldapE 
ID5388751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand+ 
Start bp623997 
End bp625094 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content36% 
IMG OID640861745 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_001397839 
Protein GI153952252 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAA AAGAATTTTT AATCGAACTT TTAAAATTTA AATCTGTTAC GCCAAATGAT 
GATGGAGCTT TAAATTTCAT CGCTATGGAA CTGAGTGATT TTGAAGCTTT TTTTATAGAA 
AAAGAAGGCA TTAAAAACCT TTTACTCACT AAAAAATTTA AAGATGAGGG TGAGCATTTA 
GCTTTTGGTG GGCATGTAGA TGTGGTGCCT GCAGGCGAAG GTTGGAGTAG CGATGCTTTC 
GTGCCTATGG AAAAAGAAAG CTTTATCTAT GCAAGGGGTG CTCAAGATAT GAAAAGCGGA 
GTAGCAGCCT TTGTAGATGC TCTAAAGAAT GCGGATTTTA AAGGAGCTAG GCTGAGTCTT 
ATTTTAACAA GTGATGAAGA AGGCGAGGCT ATATATGGAA CCAAGGCTGT TTTAGAATGG 
ATGCAAAAAA GAGATATGCT ACCTGATTAT GCCGTGGTTG CAGAGCCAAC CTGTGTTAAA 
AAAATCGGCG ATAGTATTAA AATAGGGCGT CGTGGTTCTA TCAATGGAAA GCTTTTAATC 
CGTGGAAAAC AAGGGCATGT TGCTTATCCT GAAAAATGTA TCAATCCTGT GCATGATTTT 
GCTCCAGTGT TAAAGCTTTT AGCGGGTTTT GATCTTGATC CTGGAAGTGC TGAATTTAGT 
CCTTCAAAAA TCGTTGTTAC CGATATTCGC GGAGGTATAG AGGTGTGTAA TGTTACGCCA 
AATGATTTAA AACTTATGTT TAATGTTCGC AATTCTCCTG ATACAAGCTT AGAAGATGTA 
AAAAGCTATG TAGAAAAAAT TTGTCATGGT TTAAACTATG AGTTAGAGCT AAAACAATCA 
AGTGAAGCTT TTTTGACAAA TATTGACAAT AAAATCGTTC AAAAAATGAA TGAAAGCGTT 
CAAAAAATCA CTCATGAAGT ACCAGAGCTT AATACCAAAG GTGGCACAAG TGATGCAAGG 
TATTTTGCAA AATACGGTGT AAAGGTAGTG GAATTTGGGG TTTGTAATGA TAGAATTCAC 
GCTATTGATG AAAGAGTAAG CATAGAAGAA TTTGAAAAAC TTTGCCTTGT TTTTAAAGAC 
TTGATAGAAA ATTTTTAA
 
Protein sequence
MNAKEFLIEL LKFKSVTPND DGALNFIAME LSDFEAFFIE KEGIKNLLLT KKFKDEGEHL 
AFGGHVDVVP AGEGWSSDAF VPMEKESFIY ARGAQDMKSG VAAFVDALKN ADFKGARLSL 
ILTSDEEGEA IYGTKAVLEW MQKRDMLPDY AVVAEPTCVK KIGDSIKIGR RGSINGKLLI 
RGKQGHVAYP EKCINPVHDF APVLKLLAGF DLDPGSAEFS PSKIVVTDIR GGIEVCNVTP 
NDLKLMFNVR NSPDTSLEDV KSYVEKICHG LNYELELKQS SEAFLTNIDN KIVQKMNESV 
QKITHEVPEL NTKGGTSDAR YFAKYGVKVV EFGVCNDRIH AIDERVSIEE FEKLCLVFKD 
LIENF